RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SCG2P13521 617 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 CD1DP15813 335 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 C4BPBP20851 252 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 SLC1A3P43003 542 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 NDST2P52849 883 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 NDUFV3P56181 108 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 FKBP3Q00688 224 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 FCHO2Q0JRZ9 810 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 PTK6Q13882 451 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 KIAA0141Q14154 515 aaPredicted RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 LY6DQ14210 128 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 ZNF146Q15072 292 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 MAPK11Q15759 364 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 SPANXN4Q5MJ08 99 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 RFPL4BQ6ZWI9 263 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 RAPH1Q70E73 1250 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 TIPARPQ7Z3E1 657 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 GLRX5Q86SX6 157 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 SLC25A42Q86VD7 318 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 CREBRFQ8IUR6 639 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 C4orf19Q8IY42 314 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 TIGD4Q8IY51 512 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 SLC22A15Q8IZD6 547 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 TDHQ8IZJ6 230 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 CCDC185Q8N715 623 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 NHLRC2Q8NBF2 726 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 GOT1L1Q8NHS2 421 aaPredicted RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 SPPL2AQ8TCT8 520 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 NPRL2Q8WTW4 380 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 SMPDL3AQ92484 453 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 DNASE1L2Q92874 299 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 PARK7Q99497 189 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 PAPOLGQ9BWT3 736 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 IDI2Q9BXS1 227 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 PUS3Q9BZE2 481 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 LMAN1LQ9HAT1 526 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 IL1RAPQ9NPH3 570 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 IARS2Q9NSE4 1012 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 EXOC1Q9NV70 894 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 SEPT10Q9P0V9 454 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 KLK11Q9UBX7 282 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 ARMCX3Q9UH62 379 aaPredicted RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 NOCTQ9UK39 431 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 ZNF510Q9Y2H8 683 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 SH3GLB1Q9Y371 365 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 HBS1LQ9Y450 684 aaKnown RBP1.88□□□□□ -2.11
KNTC1-213ENST00000542727 ZNF318Q5VUA4 2279 aa1.88□□□□□ -2.11
KNTC1-213ENST00000542727 RAI1Q7Z5J4 1906 aaPredicted RBP1.87□□□□□ -2.11
KNTC1-213ENST00000542727 IGKV6D-21A0A0A0MT36 114 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 KBTBD13C9JR72 458 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 INPP4BO15327 924 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 CRCPO75575 148 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 NXPH4O95158 308 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 MYOGP15173 224 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 SELEP16581 610 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 CCND3P30281 292 aaPredicted RBP1.87□□□□□ -2.11
KNTC1-213ENST00000542727 PKLRP30613 574 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 OR3A1P47881 315 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 OR3A3P47888 321 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 PRRC2AP48634 2157 aaKnown RBP1.87□□□□□ -2.11
KNTC1-213ENST00000542727 ATP4BP51164 291 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 PEX3P56589 373 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 EVCP57679 992 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 ZFP36L1Q07352 338 aaKnown RBP1.87□□□□□ -2.11
KNTC1-213ENST00000542727 SCN1BQ07699 218 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 ITPK1Q13572 414 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 GCKRQ14397 625 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 ZRANB3Q5FWF4 1079 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 ARMCX4Q5H9R4 360 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 NHSL2Q5HYW2 709 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 CCDC158Q5M9N0 1113 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 SEL1L3Q68CR1 1132 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 TCEAL6Q6IPX3 200 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 SLC27A4Q6P1M0 643 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 PODNL1Q6PEZ8 512 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 C3P1Q6ZMU1 363 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 C15orf52Q6ZUT6 534 aaKnown RBP1.87□□□□□ -2.11
KNTC1-213ENST00000542727 Q6ZVQ6 151 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 GPR141Q7Z602 305 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 KCNMB4Q86W47 210 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 CATSPER3Q86XQ3 398 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 HPS6Q86YV9 775 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 TUSC5Q8IXB3 177 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 OR8H3Q8N146 312 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 TEX26Q8N6G2 289 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 OR5M9Q8NGP3 310 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 DEPDC1BQ8WUY9 529 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.87□□□□□ -2.11
KNTC1-213ENST00000542727 CORO2AQ92828 525 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 RFT1Q96AA3 541 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 PCDHB18PQ96TA0 734 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 EDEM3Q9BZQ6 932 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 UBQLN3Q9H347 655 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 CUEDC2Q9H467 287 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 TUBB1Q9H4B7 451 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 PLEKHA3Q9HB20 300 aa1.87□□□□□ -2.11
KNTC1-213ENST00000542727 UBE2TQ9NPD8 197 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms