RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 PLAAQ9Y263 795 aa13□□□□□ -0.33
TNFSF13B-206ENST00000542136 BLACEA4D250 179 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 SMIM23A6NLE4 172 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 EIF4E1BA6NMX2 242 aaKnown RBP12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 B3GALT2O43825 422 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 ALOX12BO75342 701 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 FHP07954 510 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 RAB8AP61006 207 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 BTN3A2P78410 334 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 MAT1AQ00266 395 aaKnown RBP12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 CLCQ05315 142 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 TRAF3Q13114 568 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 ZRSR2Q15696 482 aaKnown RBP12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 CPSF6Q16630 551 aaKnown RBP eCLIP12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 SYT16Q17RD7 645 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 FRG2Q64ET8 278 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 RIPOR1Q6ZS17 1223 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 SHISA6Q6ZSJ9 500 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 MILR1Q7Z6M3 343 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 BANPQ8N9N5 519 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 OR52B6Q8NGF0 335 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 CCT6BQ92526 530 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 RGMAQ96B86 450 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 FRG2BQ96QU4 278 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 F2RL3Q96RI0 385 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 ZNF382Q96SR6 550 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 TRIM55Q9BYV6 548 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 LYRM4Q9HD34 91 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 HCN3Q9P1Z3 774 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 C19orf25Q9UFG5 118 aaPredicted RBP12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 FBXL4Q9UKA2 621 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 PLLPQ9Y342 182 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 RNF11Q9Y3C5 154 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 NUP210LQ5VU65 1888 aa12.99□□□□□ -0.33
TNFSF13B-206ENST00000542136 C4orf51C9J302 202 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 SUPT7LO94864 414 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 SEMA3DO95025 777 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 C8orf89P0DMQ9 161 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 MYL2P10916 166 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 PCNAP12004 261 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 CPA3P15088 417 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 CCL11P51671 97 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 PLA2G16P53816 162 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 PKNOX1P55347 436 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 HSD17B7P56937 341 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 RHAGQ02094 409 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 MYBPC3Q14896 1274 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 AP5B1Q2VPB7 878 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 UNC50Q53HI1 259 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 IGFL3Q6UXB1 125 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 QSOX2Q6ZRP7 698 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 UBE3DQ7Z6J8 389 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 MYLK4Q86YV6 388 aaPredicted RBP12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 TMEM151BQ8IW70 566 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 GALNT16Q8N428 558 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 OR5T3Q8NGG3 340 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 PPP4R1Q8TF05 950 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 PEX11GQ96HA9 241 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 APOPT1Q96IL0 206 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 NSUN5Q96P11 429 aaKnown RBP12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 SERPINI1Q99574 410 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 SMAD5Q99717 465 aaKnown RBP12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 TUBB6Q9BUF5 446 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 SLC25A23Q9BV35 468 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 BRF2Q9HAW0 419 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 SEMA4BQ9NPR2 832 aaPredicted RBP12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 RIC8BQ9NVN3 520 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 OXSMQ9NWU1 459 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 MS4A12Q9NXJ0 267 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 KCMF1Q9P0J7 381 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 TRPS1Q9UHF7 1281 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 SNX6Q9UNH7 406 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 MMACHCQ9Y4U1 282 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 SCN3AQ9NY46 2000 aa12.98□□□□□ -0.33
TNFSF13B-206ENST00000542136 IGHV1-45A0A0A0MS14 117 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 NSG1A0A0A6YYJ2 146 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 ZNF860A6NHJ4 632 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 FOXO6A8MYZ6 492 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 PSMD12O00232 456 aaPredicted RBP12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 CLDN4O14493 209 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 PRMT3O60678 531 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 TGFB1P01137 390 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 ALPPP05187 535 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 COX6A1P12074 109 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 HIST1H1TP22492 207 aaPredicted RBP12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 ATP5A1P25705 553 aaKnown RBP12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 RAB38P57729 211 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 FOXL2P58012 376 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 C19orf57Q0VDD7 668 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 ASPHQ12797 758 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 LCP2Q13094 533 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 BIKQ13323 160 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 RUNX2Q13950 521 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 COL9A2Q14055 689 aaPredicted RBP12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 NSDHLQ15738 373 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 LACTB2Q53H82 288 aaPredicted RBP12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 VWA5B1Q5TIE3 1220 aa12.97□□□□□ -0.33
TNFSF13B-206ENST00000542136 CPZQ66K79 652 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms