RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SLC9A5Q14940 896 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 HHATQ5VTY9 493 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 PAGE2Q7Z2X7 111 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 GPR155Q7Z3F1 870 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 PDSS2Q86YH6 399 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 METTL27Q8N6F8 245 aaPredicted RBP17.77■□□□□ 0.44
VPS33A-205ENST00000541169 CDYL2Q8N8U2 506 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 OR51Q1Q8NH59 317 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 SELENOMQ8WWX9 145 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 QRFPRQ96P65 431 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 GATA5Q9BWX5 397 aaPredicted RBP17.77■□□□□ 0.44
VPS33A-205ENST00000541169 KLHL31Q9H511 634 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 LYRM4Q9HD34 91 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 PFDN4Q9NQP4 134 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 ADAM29Q9UKF5 820 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 MRPS33Q9Y291 106 aaKnown RBP17.77■□□□□ 0.44
VPS33A-205ENST00000541169 ASPMQ8IZT6 3477 aa17.77■□□□□ 0.43
VPS33A-205ENST00000541169 MAP1BP46821 2468 aaKnown RBP17.76■□□□□ 0.43
VPS33A-205ENST00000541169 DMXL2Q8TDJ6 3036 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 TMEM120BA0PK00 339 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 TMEM114B3SHH9 223 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 SGK494L7N484 410 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 PSMD12O00232 456 aaPredicted RBP17.76■□□□□ 0.43
VPS33A-205ENST00000541169 SCELO95171 688 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 BMP10O95393 424 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 FGF4P08620 206 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 UROSP10746 265 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 MMP11P24347 488 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 PLA2G16P53816 162 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 CXADRP78310 365 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 OR4C11Q6IEV9 310 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 RNF165Q6ZSG1 346 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 RPS27LQ71UM5 84 aaKnown RBP17.76■□□□□ 0.43
VPS33A-205ENST00000541169 TRIM42Q8IWZ5 723 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 RAB3IL1Q8TBN0 382 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.76■□□□□ 0.43
VPS33A-205ENST00000541169 TBC1D20Q96BZ9 403 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 F2RL3Q96RI0 385 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 SPSB2Q99619 263 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 PRDM7Q9NQW5 492 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 CTSFQ9UBX1 484 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 ZNF225Q9UK10 706 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 POLHQ9Y253 713 aa17.76■□□□□ 0.43
VPS33A-205ENST00000541169 MANBAO00462 879 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 PPP6CO00743 305 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 FFAR3O14843 346 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 GPR42O15529 346 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 ATP8B1O43520 1251 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 RDH16O75452 317 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 TBX6O95947 436 aaPredicted RBP17.75■□□□□ 0.43
VPS33A-205ENST00000541169 SERPINE1P05121 402 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 NEFHP12036 1026 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 TSPAN8P19075 237 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 HIST1H1TP22492 207 aaPredicted RBP17.75■□□□□ 0.43
VPS33A-205ENST00000541169 XCR1P46094 333 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 RRADP55042 308 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 RPS13P62277 151 aaKnown RBP17.75■□□□□ 0.43
VPS33A-205ENST00000541169 RHDQ02161 417 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 TUBB8Q3ZCM7 444 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 PRSS41Q7RTY9 318 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 ZCCHC7Q8N3Z6 543 aaKnown RBP17.75■□□□□ 0.43
VPS33A-205ENST00000541169 OR6Y1Q8NGX8 325 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 RNF31Q96EP0 1072 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 METTL2AQ96IZ6 378 aaKnown RBP17.75■□□□□ 0.43
VPS33A-205ENST00000541169 CCT7Q99832 543 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 CRB3Q9BUF7 120 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 PRORYQ9H606 182 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 CPNE5Q9HCH3 593 aa17.75■□□□□ 0.43
VPS33A-205ENST00000541169 PEX12O00623 359 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 CLDN4O14493 209 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 UBFD1O14562 309 aaKnown RBP17.74■□□□□ 0.43
VPS33A-205ENST00000541169 CHST10O43529 356 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 GUCY1B2O75343 617 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 ATP5A1P25705 553 aaKnown RBP17.74■□□□□ 0.43
VPS33A-205ENST00000541169 SSR2P43308 183 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 NEK2P51955 445 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 KLC1Q07866 573 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 ERV3-1Q14264 604 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 ADNP2Q6IQ32 1131 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 NUDT13Q86X67 352 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 ACOT4Q8N9L9 421 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 ADAMTS17Q8TE56 1095 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 METTL21AQ8WXB1 218 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 MECRQ9BV79 373 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 OR51B5Q9H339 312 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 DDX31Q9H8H2 851 aaKnown RBP17.74■□□□□ 0.43
VPS33A-205ENST00000541169 VPS29Q9UBQ0 182 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 PHF11Q9UIL8 331 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 C3orf18Q9UK00 162 aa17.74■□□□□ 0.43
VPS33A-205ENST00000541169 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.74■□□□□ 0.43
VPS33A-205ENST00000541169 A0A1B0GTL3 188 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 IDSB3KWA1 339 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 KLHL41O60662 606 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 PDYNP01213 254 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 HEXBP07686 556 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 FHP07954 510 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 TLX1P31314 330 aaPredicted RBP17.73■□□□□ 0.43
VPS33A-205ENST00000541169 EMP2P54851 167 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 VWA2Q5GFL6 755 aa17.73■□□□□ 0.43
VPS33A-205ENST00000541169 ARL13AQ5H913 290 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms