RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 LMNTD1Q8N9Z9 388 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 LINC01555Q8NAE3 123 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 OR4K2Q8NGD2 314 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 OR5M3Q8NGP4 307 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 OR10Q1Q8NGQ4 319 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 OR2L8Q8NGY9 312 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 C16orf52Q8NHV5 167 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 PHOSPHO1Q8TCT1 267 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 TMEM158Q8WZ71 300 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 TMEM125Q96AQ2 219 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 CABS1Q96KC9 395 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 OLFM3Q96PB7 478 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 RNF157Q96PX1 679 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ERGIC2Q96RQ1 377 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 CYTH2Q99418 400 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 NPAS2Q99743 824 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 TTYH2Q9BSA4 534 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 MENTQ9BUN1 341 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ISCUQ9H1K1 167 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 TRIM45Q9H8W5 580 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 MMP25Q9NPA2 562 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 TRPS1Q9UHF7 1281 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ANAPC7Q9UJX3 599 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 PLAGL1Q9UM63 463 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 KLF13Q9Y2Y9 288 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-214ENST00000540865 HEY1Q9Y5J3 304 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 ARL5AQ9Y689 179 aa4.31□□□□□ -1.72
SNHG1-214ENST00000540865 LOC105369274A0A096LPK9 316 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 IGHV3-20A0A0C4DH32 117 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 LOC102723532A0A0G2JNH3 316 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 A0A0G2JNJ9 132 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 A0A0J9YVX5 310 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 SLC5A10A0PJK1 596 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 LGALS16A8MUM7 142 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 KLRC4-KLRK1H3BQV0 150 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 QSOX1O00391 747 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 NDC80O14777 642 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 APOL1O14791 398 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 FFAR3O14843 346 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 BCKDKO14874 412 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 GSTA4O15217 222 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 GPR42O15529 346 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 HS6ST1O60243 411 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 CDC40O60508 579 aaKnown RBP eCLIP4.3□□□□□ -1.725e-11■□□□□ 11.3
SNHG1-214ENST00000540865 PHF2O75151 1096 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 IFNA2P01563 188 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 FTH1P02794 183 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 RPN2P04844 631 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 EIF2S1P05198 315 aaKnown RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 ZFXP17010 805 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 KDELR1P24390 212 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 PTPN3P26045 913 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 ACRV1P26436 265 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 ACVR2AP27037 513 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 GJC1P36383 396 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 PRKCIP41743 596 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 CYB561P49447 251 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 AGTR2P50052 363 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 HLCSP50747 726 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 MECP2P51608 486 aaKnown RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 EFNA3P52797 238 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 TAS2R50P59544 299 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 UBXN1Q04323 297 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 MPP3Q13368 585 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 GRB7Q14451 532 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 NAA25Q14CX7 972 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 GXYLT1Q4G148 440 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 SYTL3Q4VX76 610 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 Q5PR19 223 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 SLC9A4Q6AI14 798 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 PODNL1Q6PEZ8 512 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 B3GNT6Q6ZMB0 384 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 C16orf47Q6ZP98 133 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 ZNF662Q6ZS27 426 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 BZW1Q7L1Q6 419 aaKnown RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 SERPINA9Q86WD7 417 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 RPS19BP1Q86WX3 136 aaKnown RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 CXorf67Q86X51 503 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 VSIG1Q86XK7 387 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 LIX1LQ8IVB5 337 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 P3H2Q8IVL5 708 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 OR4N4Q8N0Y3 316 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 C2orf73Q8N5S3 287 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 CLDN19Q8N6F1 224 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 ZFP62Q8NB50 900 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 IPMKQ8NFU5 416 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 CREB3L4Q8TEY5 395 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 ELMO1Q92556 727 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 RNASE6Q93091 150 aaKnown RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 MFSD3Q96ES6 412 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 MMABQ96EY8 250 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 LRRC46Q96FV0 321 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 OXNAD1Q96HP4 312 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-214ENST00000540865 FCRL5Q96RD9 977 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 PIP5K1AQ99755 562 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 GORASP1Q9BQQ3 440 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 RAB11FIP5Q9BXF6 653 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 VN1R1Q9GZP7 353 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 CDCP1Q9H5V8 836 aa4.3□□□□□ -1.72
SNHG1-214ENST00000540865 FAM96AQ9H5X1 160 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms