RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 LOC100130705A0A1B0GUX0 176 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 HS6ST1O60243 411 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 KCNJ13O60928 360 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 PAK4O96013 591 aaPredicted RBP13.17□□□□□ -0.3
RTN3-210ENST00000540798 CRHBPP24387 322 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 PCSK6P29122 969 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 RYKP34925 604 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 ISL1P61371 349 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 GPR141Q7Z602 305 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 TSEN54Q7Z6J9 526 aaKnown RBP13.17□□□□□ -0.3
RTN3-210ENST00000540798 MAL2Q969L2 176 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
RTN3-210ENST00000540798 SORBS1Q9BX66 1292 aaKnown RBP13.17□□□□□ -0.3
RTN3-210ENST00000540798 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
RTN3-210ENST00000540798 LHX9Q9NQ69 397 aa13.17□□□□□ -0.3
RTN3-210ENST00000540798 FAF1Q9UNN5 650 aaPredicted RBP13.17□□□□□ -0.3
RTN3-210ENST00000540798 TIE1P35590 1138 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 DAPP51397 102 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 RAD23AP54725 363 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 GABARAPL2P60520 117 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 ADAM15Q13444 863 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 CTU2Q2VPK5 515 aaKnown RBP13.16□□□□□ -0.3
RTN3-210ENST00000540798 DUS1LQ6P1R4 473 aaKnown RBP13.16□□□□□ -0.3
RTN3-210ENST00000540798 DOK1Q99704 481 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 TUBA1CQ9BQE3 449 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 ACAT2Q9BWD1 397 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 FBRSQ9HAH7 460 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 U3KQV3 271 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
RTN3-210ENST00000540798 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
RTN3-210ENST00000540798 CCDC160A6NGH7 325 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 DDCP20711 480 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 PSMB5P28074 263 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 TTKP33981 857 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 IGFALSP35858 605 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 YAP1P46937 504 aaKnown RBP13.16□□□□□ -0.3
RTN3-210ENST00000540798 PMS2P3Q13401 168 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 RAB30Q15771 203 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 PIK3C3Q8NEB9 887 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 C17orf50Q8WW18 174 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 TM4SF18Q96CE8 201 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 DOHHQ9BU89 302 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 SLC6A16Q9GZN6 736 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
RTN3-210ENST00000540798 HEATR5BQ9P2D3 2071 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ANKDD1BA6NHY2 528 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 hCG_2039718K7EN88 272 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ETFAP13804 333 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 PKLRP30613 574 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 POLR2IP36954 125 aaKnown RBP13.15□□□□□ -0.3
RTN3-210ENST00000540798 FRKP42685 505 aaPredicted RBP13.15□□□□□ -0.3
RTN3-210ENST00000540798 GSTM5P46439 218 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 SEC13P55735 322 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ESRRGP62508 458 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 SELENOWP63302 87 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 DYNC1I2Q13409 638 aaKnown RBP13.15□□□□□ -0.3
RTN3-210ENST00000540798 TMEM196Q5HYL7 178 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 C6orf141Q5SZD1 244 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 GCNT6Q5T4J0 391 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 FAHD1Q6P587 224 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 KCTD8Q6ZWB6 473 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 CHST15Q7LFX5 561 aaPredicted RBP13.15□□□□□ -0.3
RTN3-210ENST00000540798 MMP21Q8N119 569 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ZNF566Q969W8 418 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 EPYCQ99645 322 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ARPC5LQ9BPX5 153 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 SLC17A9Q9BYT1 436 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ADPRHL2Q9NX46 363 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 FBXL12Q9NXK8 326 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 IGKV1-8A0A0C4DH67 115 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 A0A1W2PRB8 838 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 TRIM64BA6NI03 449 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 SUV39H1O43463 412 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 JRKO75564 520 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 NTRK1P04629 796 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ACP5P13686 325 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 IGFBP5P24593 272 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 NTSR1P30989 418 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 CD47Q08722 323 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ERI1Q8IV48 349 aaKnown RBP13.15□□□□□ -0.3
RTN3-210ENST00000540798 NATD1Q8N6N6 113 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 MIPOL1Q8TD10 442 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 CAMK1GQ96NX5 476 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ING2Q9H160 280 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 RAD21L1Q9H4I0 556 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ADAM29Q9UKF5 820 aa13.15□□□□□ -0.3
RTN3-210ENST00000540798 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.15□□□□□ -0.3
RTN3-210ENST00000540798 A0A1W2PQF6 199 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 A0A1W2PQU0 124 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 B4GAT1O43505 415 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 DCKP27707 260 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 ADPRHP54922 357 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 CSNK1G2P78368 415 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 KEAP1Q14145 624 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 RAB39AQ14964 217 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 SLC5A12Q1EHB4 618 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 OR2L8Q8NGY9 312 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 ASB12Q8WXK4 309 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 C12orf66Q96MD2 445 aa13.15□□□□□ -0.31
RTN3-210ENST00000540798 F2RL3Q96RI0 385 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms