RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 TPP2P29144 1249 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TIA1P31483 386 aaKnown RBP eCLIP17.96■□□□□ 0.474e-6■■■■□ 22.9
TNFRSF1A-213ENST00000540022 SSR2P43308 183 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 GCGRP47871 477 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ARFIP1P53367 373 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 BTN3A2P78410 334 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 MC2RQ01718 297 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TARDBPQ13148 414 aaKnown RBP eCLIP17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 DEFB134Q4QY38 66 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 METTL21CQ5VZV1 264 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 GALNT18Q6P9A2 607 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TLDC1Q6P9B6 456 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 ABHD13Q7L211 337 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 SPATA19Q7Z5L4 167 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 DTWD1Q8N5C7 304 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TTC29Q8NA56 475 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 KDF1Q8NAX2 398 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 OR8K5Q8NH50 307 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 QRFPRQ96P65 431 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 TBCDQ9BTW9 1192 aa17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 AKAP7Q9P0M2 348 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1A-213ENST00000540022 CFAP47Q6ZTR5 3102 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 A0A1W2PNU3 283 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 KLHL18O94889 574 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TIAF1O95411 115 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 BCKDHAP12694 445 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ITIH1P19827 911 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NCF2P19878 526 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TACR1P25103 407 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ATP5A1P25705 553 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 EMP3P54852 163 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TGM3Q08188 693 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MAD2L1Q13257 205 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 GARNL3Q5VVW2 1013 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 RIPOR1Q6ZS17 1223 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 RAB11FIP2Q7L804 512 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NUDT13Q86X67 352 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CACNA2D3Q8IZS8 1091 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ANKS4BQ8N8V4 417 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CTRCQ99895 268 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 DDX31Q9H8H2 851 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FBXO8Q9NRD0 319 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CUTCQ9NTM9 273 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 AIG1Q9NVV5 245 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ASIC5Q9NY37 505 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NOP53Q9NZM5 478 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ADAM29Q9UKF5 820 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ADAMTS20P59510 1910 aa17.95■□□□□ 0.46
TNFRSF1A-213ENST00000540022 LAMA5O15230 3695 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 B4E171 279 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 POLR1CO15160 346 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ZNF749O43361 778 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FOXS1O43638 330 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PCDH7O60245 1069 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MYO1DO94832 1006 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SCELO95171 688 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ANXA4P09525 319 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 G6PDP11413 515 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FGF5P12034 268 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 SDC1P18827 310 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 HIST1H1TP22492 207 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CERS1P27544 350 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TSPAN7P41732 249 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TSFMP43897 325 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 HERC3Q15034 1050 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NDUFA9Q16795 377 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MUM1Q2TAK8 710 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FAM214AQ32MH5 1076 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PAGE2Q7Z2X7 111 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TMPRSS12Q86WS5 348 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PPP1R3BQ86XI6 285 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PDSS2Q86YH6 399 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 LIX1Q8N485 282 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ACOT4Q8N9L9 421 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 RNF31Q96EP0 1072 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 BAIAP2L1Q9UHR4 511 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MCM8Q9UJA3 840 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TRIM33Q9UPN9 1127 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 EIF3LQ9Y262 564 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 GPR45Q9Y5Y3 372 aa17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ANKRD11Q6UB99 2663 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CCDC187A0A096LP49 1063 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 A0A0A6YYD5 115 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 TMPRSS11DO60235 418 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 GALR3O60755 368 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ACPPP15309 386 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ETV5P41161 510 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 MTTPP55157 894 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 FAM53BQ14153 422 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 IL11RAQ14626 422 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CCNYL2Q5T2Q4 361 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PWWP2BQ6NUJ5 590 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 BPHLQ86WA6 291 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 CACTIN-AS1Q8N1I8 211 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 GALNT15Q8N3T1 639 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 ZCCHC7Q8N3Z6 543 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 OR9A4Q8NGU2 314 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 PMEPA1Q969W9 287 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 EGLN2Q96KS0 407 aa17.93■□□□□ 0.46
TNFRSF1A-213ENST00000540022 NMUR2Q9GZQ4 415 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms