RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 GAL3ST3Q96A11 431 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 SEC16BQ96JE7 1060 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 ZNF354BQ96LW1 612 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 CAPS2Q9BXY5 557 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 PITHD1Q9GZP4 211 aaPredicted RBP15.73■□□□□ 0.11
DDB1-215ENST00000539712 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.73■□□□□ 0.11
DDB1-215ENST00000539712 RHBGQ9H310 441 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 ALG9Q9H6U8 611 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 CNOT10Q9H9A5 744 aaKnown RBP15.73■□□□□ 0.11
DDB1-215ENST00000539712 KCNK13Q9HB14 408 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 OLAHQ9NV23 265 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 CD274Q9NZQ7 290 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 SLC5A6Q9Y289 635 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 A0A0G2JN53 185 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 TGFBR3LH3BV60 316 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 MTHFD2P13995 350 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 TFEBP19484 476 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 MST1P26927 711 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 GSTM2P28161 218 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 CD96P40200 585 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 CASP2P42575 452 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 HNRNPFP52597 415 aaKnown RBP15.72■□□□□ 0.11
DDB1-215ENST00000539712 STXBP1P61764 594 aaKnown RBP15.72■□□□□ 0.11
DDB1-215ENST00000539712 NAB1Q13506 487 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 TUBA3CQ13748 450 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 INAQ16352 499 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 PDK4Q16654 411 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 TUBA3EQ6PEY2 450 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 UBE3DQ7Z6J8 389 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 CENPLQ8N0S6 344 aaPredicted RBP15.72■□□□□ 0.11
DDB1-215ENST00000539712 MDS2Q8NDY4 140 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 TMEM52Q8NDY8 209 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 TTLQ8NG68 377 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 NR4A3Q92570 626 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 MAGEB10Q96LZ2 347 aaPredicted RBP15.72■□□□□ 0.11
DDB1-215ENST00000539712 C16orf45Q96MC5 204 aaPredicted RBP15.72■□□□□ 0.11
DDB1-215ENST00000539712 SIGLEC12Q96PQ1 595 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 CD244Q9BZW8 370 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 PRDM9Q9NQV7 894 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 TEKT2Q9UIF3 430 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 RNF112Q9ULX5 631 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 OSGIN2Q9Y236 505 aa15.72■□□□□ 0.11
DDB1-215ENST00000539712 ERI3O43414 337 aaKnown RBP15.71■□□□□ 0.11
DDB1-215ENST00000539712 CLDN1O95832 211 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 CRABP2P29373 138 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 IRF9Q00978 393 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 CKAP4Q07065 602 aaKnown RBP15.71■□□□□ 0.11
DDB1-215ENST00000539712 PCDH1Q08174 1060 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 ELOAQ14241 798 aaKnown RBP15.71■□□□□ 0.11
DDB1-215ENST00000539712 SLMAPQ14BN4 828 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 TBCCQ15814 346 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 MEP1AQ16819 746 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 XKR6Q5GH73 641 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 ZNF468Q5VIY5 522 aaPredicted RBP15.71■□□□□ 0.11
DDB1-215ENST00000539712 C8orf74Q6P047 294 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 ABHD17CQ6PCB6 329 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 SCUBE1Q8IWY4 988 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 KRT78Q8N1N4 520 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 SNX31Q8N9S9 440 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 OR2L5Q8NG80 312 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 STAG3L4Q8TBR4 150 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 NXNL1Q96CM4 212 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 PTCD3Q96EY7 689 aaKnown RBP15.71■□□□□ 0.11
DDB1-215ENST00000539712 NMRAL1Q9HBL8 299 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 PRDM7Q9NQW5 492 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 ANKRD10Q9NXR5 420 aa15.71■□□□□ 0.11
DDB1-215ENST00000539712 DMGDHQ9UI17 866 aaKnown RBP15.71■□□□□ 0.11
DDB1-215ENST00000539712 A1L4Q6 167 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 UBXN8O00124 270 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 CYR61O00622 381 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 CLGNO14967 610 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 KERAO60938 352 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 URI1O94763 535 aaPredicted RBP15.7■□□□□ 0.1
DDB1-215ENST00000539712 C2P06681 752 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 UQCRHP07919 91 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 STSP08842 583 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 LTA4HP09960 611 aaKnown RBP15.7■□□□□ 0.1
DDB1-215ENST00000539712 PLA2G16P53816 162 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 CHIT1Q13231 466 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 BMPR2Q13873 1038 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 C4orf17Q53FE4 359 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 MROH9Q5TGP6 573 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 SPINK14Q6IE38 97 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 RAPH1Q70E73 1250 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 ZNF227Q86WZ6 799 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 RELL1Q8IUW5 271 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 CYP4X1Q8N118 509 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 LGI4Q8N135 537 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 ARMC10Q8N2F6 343 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 MMGT1Q8N4V1 131 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 NOA1Q8NC60 698 aaKnown RBP15.7■□□□□ 0.1
DDB1-215ENST00000539712 UBTD2Q8WUN7 234 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 KCTD4Q8WVF5 259 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 EXT2Q93063 718 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 C5orf34Q96MH7 638 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 GPR78Q96P69 363 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 F2RL3Q96RI0 385 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 EFCAB11Q9BUY7 163 aa15.7■□□□□ 0.1
DDB1-215ENST00000539712 NPLQ9BXD5 320 aaPredicted RBP15.7■□□□□ 0.1
DDB1-215ENST00000539712 HES7Q9BYE0 225 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms