RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 TRIM2Q9C040 744 aa14.02□□□□□ -0.17
CACNB1-206ENST00000539338 NEUROD4Q9HD90 331 aa14.02□□□□□ -0.17
CACNB1-206ENST00000539338 PNO1Q9NRX1 252 aaKnown RBP14.02□□□□□ -0.17
CACNB1-206ENST00000539338 GRIP1Q9Y3R0 1128 aa14.02□□□□□ -0.17
CACNB1-206ENST00000539338 DNAJC15Q9Y5T4 150 aa14.02□□□□□ -0.17
CACNB1-206ENST00000539338 MYH15Q9Y2K3 1946 aa14.02□□□□□ -0.17
CACNB1-206ENST00000539338 A0A1W2PRG6 482 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 KIAA0355O15063 1070 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 RASAL1O95294 804 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 VLDLRP98155 873 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 PUM1Q14671 1186 aaKnown RBP eCLIP14.01□□□□□ -0.17
CACNB1-206ENST00000539338 CNDP2Q96KP4 475 aaKnown RBP14.01□□□□□ -0.17
CACNB1-206ENST00000539338 TSSK6Q9BXA6 273 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 TMEM9Q9P0T7 183 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 PADI2Q9Y2J8 665 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF451Q9Y4E5 1061 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 TFPTP0C1Z6 253 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 BCKDHAP12694 445 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 MATN1P21941 496 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 CD83Q01151 205 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 MARVELD2Q8N4S9 558 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 UCKL1Q9NWZ5 548 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 MYH3P11055 1940 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 ZCWPW2A0A1B0GU75 182 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 TSPAN6O43657 245 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 LEFTY1O75610 366 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 RPP14O95059 124 aaKnown RBP14.01□□□□□ -0.17
CACNB1-206ENST00000539338 SERPINA3P01011 423 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 CD2P06729 351 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 CDH11P55287 796 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 SH3BP2P78314 561 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 PITPNAQ00169 270 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF423Q2M1K9 1284 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF676Q8N7Q3 588 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 HDAC2Q92769 488 aaKnown RBP14.01□□□□□ -0.17
CACNB1-206ENST00000539338 RANBP9Q96S59 729 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 SYT11Q9BT88 431 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 MS4A12Q9NXJ0 267 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 EIF3KQ9UBQ5 218 aaKnown RBP14.01□□□□□ -0.17
CACNB1-206ENST00000539338 OARD1Q9Y530 152 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 NWD2Q9ULI1 1742 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 C2orf78A6NCI8 922 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 B4DGG1 531 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 SOCS2O14508 198 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 PDCD5O14737 125 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 FDXRP22570 491 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 CD68P34810 354 aaPredicted RBP14.01□□□□□ -0.17
CACNB1-206ENST00000539338 CTSOP43234 321 aaPredicted RBP14.01□□□□□ -0.17
CACNB1-206ENST00000539338 TUBA1BP68363 451 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 RING1Q06587 406 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 TUBA1AQ71U36 451 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 C17orf62Q9BQA9 187 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 POLE3Q9NRF9 147 aa14.01□□□□□ -0.17
CACNB1-206ENST00000539338 H7BY64 318 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 PTGESO14684 152 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ACRV1P26436 265 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 HTR1EP28566 365 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 TSPAN5P62079 268 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ST3GAL3Q11203 375 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 TUBA3CQ13748 450 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 PLEKHS1Q5SXH7 462 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 BLOC1S3Q6QNY0 202 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 RTP4Q96DX8 246 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 PRAP1Q96NZ9 151 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 REEP4Q9H6H4 257 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 PCDHGB7Q9Y5F8 929 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 G3V2L1 256 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 J3QLW9 94 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 RENP00797 406 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ZNF19P17023 458 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ACADLP28330 430 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 MLLT10P55197 1068 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 C18orf21Q32NC0 220 aaPredicted RBP14□□□□□ -0.17
CACNB1-206ENST00000539338 REEP3Q6NUK4 255 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 DPY19L3Q6ZPD9 716 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 NCSTNQ92542 709 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 DCBLD2Q96PD2 775 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 LGR4Q9BXB1 951 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 FAM117AQ9C073 453 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 RGPD5Q99666 1765 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 A0A096LPI6 279 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 OR6C70A6NIJ9 312 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 K7ERQ8 282 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 TSPAN9O75954 239 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 S100A9P06702 114 aaKnown RBP14□□□□□ -0.17
CACNB1-206ENST00000539338 EDNRAP25101 427 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 CBLBQ13191 982 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ATG9BQ674R7 924 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 CENPSQ8N2Z9 138 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 ARFGAP1Q8N6T3 406 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 TMEM150CB9EJG8 249 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 SOCS5O75159 536 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 EEDO75530 441 aaKnown RBP14□□□□□ -0.17
CACNB1-206ENST00000539338 NUP54Q7Z3B4 507 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 DCUN1D3Q8IWE4 304 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 FAM46DQ8NEK8 389 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 TM9SF4Q92544 642 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 PEX13Q92968 403 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 TMEM80Q96HE8 168 aa14□□□□□ -0.17
CACNB1-206ENST00000539338 RMI1Q9H9A7 625 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms