RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 GPR139Q6DWJ6 353 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 CGB2Q6NT52 195 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 Q71RC1 249 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-209ENST00000539197 TEX26Q8N6G2 289 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 ZNF525Q8N782 197 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 U2AF1L4Q8WU68 220 aaKnown RBP3.35□□□□□ -1.87
CCDC7-209ENST00000539197 ZNF799Q96GE5 643 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 ANKRD27Q96NW4 1050 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 VNN3Q9NY84 501 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 PLEKHA6Q9Y2H5 1048 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 HEG1Q9ULI3 1381 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 LOC390937A0A1W2PQ73 354 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 IGLON5A6NGN9 336 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 LMO7DNF2Z398 122 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 TNFSF11O14788 317 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 AHCYL1O43865 530 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 TADA2AO75478 443 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 MEOX2P50222 304 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 CALD1Q05682 793 aaKnown RBP3.34□□□□□ -1.87
CCDC7-209ENST00000539197 KRT39Q6A163 491 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 ARMCX5Q6P1M9 558 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 TLK2Q86UE8 772 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 PRSS35Q8N3Z0 413 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 XAB2Q9HCS7 855 aaKnown RBP3.34□□□□□ -1.87
CCDC7-209ENST00000539197 MORF4L1Q9UBU8 362 aa3.34□□□□□ -1.87
CCDC7-209ENST00000539197 TCRBV21S2A2A0A5A6 115 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 MLNRO43193 412 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 SCO2O43819 266 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 TSC22D2O75157 780 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 MT-ND2P03891 347 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 MC5RP33032 325 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 CSE1LP55060 971 aaKnown RBP3.33□□□□□ -1.88
CCDC7-209ENST00000539197 FUT10Q6P4F1 479 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 ZNF600Q6ZNG1 722 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 BRINP3Q76B58 766 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 CARNMT1Q8N4J0 409 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 POGLUT1Q8NBL1 392 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 SIGLEC12Q96PQ1 595 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 LIME1Q9H400 295 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 ANAPC2Q9UJX6 822 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 TRPV2Q9Y5S1 764 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 FAM169AQ9Y6X4 670 aa3.33□□□□□ -1.88
CCDC7-209ENST00000539197 IGKV6-21A0A0C4DH24 114 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 SYNDIG1LA6NDD5 238 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 ZSCAN5CA6NGD5 496 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-209ENST00000539197 ODC1P11926 461 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 BRCC3P46736 316 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 CAPZA2P47755 286 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 ADARP55265 1226 aaKnown RBP3.32□□□□□ -1.88
CCDC7-209ENST00000539197 EVCP57679 992 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 PRPF4BQ13523 1007 aaKnown RBP3.32□□□□□ -1.88
CCDC7-209ENST00000539197 SNTB1Q13884 538 aaKnown RBP3.32□□□□□ -1.88
CCDC7-209ENST00000539197 GRB14Q14449 540 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 C9orf152Q5JTZ5 239 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 RFWD3Q6PCD5 774 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 TRMT11Q7Z4G4 463 aaKnown RBP3.32□□□□□ -1.88
CCDC7-209ENST00000539197 PRUNE1Q86TP1 453 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 AMIGO1Q86WK6 493 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 SPATA33Q96N06 139 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 MCCC1Q96RQ3 725 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-209ENST00000539197 PLEKHA3Q9HB20 300 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 ITGA11Q9UKX5 1188 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 PASKQ96RG2 1323 aa3.32□□□□□ -1.88
CCDC7-209ENST00000539197 TRBC2A0A5B9 178 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 RHBDL1O75783 438 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 PSMD10O75832 226 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 GOT1P17174 413 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 CTNNA2P26232 953 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 PEX3P56589 373 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 RBPJQ06330 500 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 ALCAMQ13740 583 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 RALBP1Q15311 655 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 LRRC37A5PQ49AS3 106 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
CCDC7-209ENST00000539197 CFAP161Q6P656 301 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 ZNRF1Q8ND25 227 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 CFAP57Q96MR6 1250 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 LRRC3BQ96PB8 259 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 RCHY1Q96PM5 261 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 PCDHB18PQ96TA0 734 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 HSD17B14Q9BPX1 270 aa3.31□□□□□ -1.88
CCDC7-209ENST00000539197 NIP7Q9Y221 180 aaKnown RBP eCLIP3.31□□□□□ -1.88
CCDC7-209ENST00000539197 E5RGE8 158 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 FBP2O00757 339 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 LYPD3O95274 346 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 DNTTP04053 509 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 NR2F1P10589 423 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 EPORP19235 508 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 HMGCS2P54868 508 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 MTCP1P56278 107 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 ERVPABLB-1P60509 514 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 RPS27AP62979 156 aaKnown RBP3.3□□□□□ -1.88
CCDC7-209ENST00000539197 CKAP4Q07065 602 aaKnown RBP3.3□□□□□ -1.88
CCDC7-209ENST00000539197 PCK2Q16822 640 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 ARMC4Q5T2S8 1044 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 ENOSF1Q7L5Y1 443 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 PRPF39Q86UA1 669 aaKnown RBP3.3□□□□□ -1.88
CCDC7-209ENST00000539197 SPSB1Q96BD6 273 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 GDAP1L1Q96MZ0 367 aa3.3□□□□□ -1.88
CCDC7-209ENST00000539197 AGTPBP1Q9UPW5 1226 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms