RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 BTN3A2P78410 334 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 PMP22Q01453 160 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 GLE1Q53GS7 698 aaKnown RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 ACER2Q5QJU3 275 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 NIPAL1Q6NVV3 410 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 TMIGD1Q6UXZ0 262 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 RAPH1Q70E73 1250 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 CTAGE4Q8IX94 777 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 KIF2BQ8N4N8 673 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 M1APQ8TC57 530 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 GAL3ST3Q96A11 431 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 MRRFQ96E11 262 aaKnown RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 WDR34Q96EX3 536 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 C5orf34Q96MH7 638 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 PTCHD1Q96NR3 888 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 SLX1AQ9BQ83 275 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 CDC42EP4Q9H3Q1 356 aaKnown RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 EHD1Q9H4M9 534 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 ALG9Q9H6U8 611 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 NT5DC2Q9H857 520 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 CNOT10Q9H9A5 744 aaKnown RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 MMP25Q9NPA2 562 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 NECTIN3Q9NQS3 549 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 ANKRD10Q9NXR5 420 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 A8MUA0 341 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 SUPT3HB4E1H0 165 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 CLGNO14967 610 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 CCNT2O60583 730 aaKnown RBP14.04□□□□□ -0.16
RAB40B-202ENST00000538809 PRMT3O60678 531 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 PRAMEF2O60811 474 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 KERAO60938 352 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 SUPT3HO75486 399 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 STK16O75716 305 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 DDAH2O95865 285 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 LTA4HP09960 611 aaKnown RBP14.04□□□□□ -0.16
RAB40B-202ENST00000538809 MTHFD2P13995 350 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 TFEBP19484 476 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 CD22P20273 847 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 TDGF1P3P51864 188 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 KCNK10P57789 538 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 IRF9Q00978 393 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 BMPR2Q13873 1038 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 INAQ16352 499 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 PDK4Q16654 411 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 XKR6Q5GH73 641 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 H3F3CQ6NXT2 135 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 QSOX2Q6ZRP7 698 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 VN1R5Q7Z5H4 357 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 KRT78Q8N1N4 520 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 TTLQ8NG68 377 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 SUN3Q8TAQ9 357 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 STAG3L4Q8TBR4 150 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 UBTD2Q8WUN7 234 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 NR4A3Q92570 626 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 NXNL1Q96CM4 212 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 MS4A6EQ96DS6 147 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 ZNF354BQ96LW1 612 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 SIGLEC12Q96PQ1 595 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 CAPS2Q9BXY5 557 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 HES7Q9BYE0 225 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 PITHD1Q9GZP4 211 aaPredicted RBP14.04□□□□□ -0.16
RAB40B-202ENST00000538809 CLK4Q9HAZ1 481 aaKnown RBP14.04□□□□□ -0.16
RAB40B-202ENST00000538809 NMRAL1Q9HBL8 299 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 SNX15Q9NRS6 342 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 NUDT4Q9NZJ9 180 aa14.04□□□□□ -0.16
RAB40B-202ENST00000538809 MTRF1LQ9UGC7 380 aaKnown RBP14.04□□□□□ -0.16
RAB40B-202ENST00000538809 UBXN8O00124 270 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 RASAL1O95294 804 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 ALDOAP04075 364 aaKnown RBP14.03□□□□□ -0.16
RAB40B-202ENST00000538809 C2P06681 752 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 GSTM2P28161 218 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 PHBP35232 272 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 PLA2G16P53816 162 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 PCDH1Q08174 1060 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 TUBA3CQ13748 450 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 RUNX2Q13950 521 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 DOC2AQ14183 400 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 MEP1AQ16819 746 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 ADPRMQ3LIE5 342 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 ZNF766Q5HY98 468 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 MROH9Q5TGP6 573 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 ZNF324BQ6AW86 544 aaPredicted RBP14.03□□□□□ -0.16
RAB40B-202ENST00000538809 TUBA3EQ6PEY2 450 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 CEP128Q6ZU80 1094 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 CCDC91Q7Z6B0 441 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 TBC1D1Q86TI0 1168 aaPredicted RBP14.03□□□□□ -0.16
RAB40B-202ENST00000538809 RHEBL1Q8TAI7 183 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 KCTD4Q8WVF5 259 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 SLC44A1Q8WWI5 657 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 ISL2Q96A47 359 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 SEC16BQ96JE7 1060 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 FAR2Q96K12 515 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 FMO2Q99518 471 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 PRDM9Q9NQV7 894 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 ABI3Q9P2A4 366 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 ZNF490Q9ULM2 529 aaPredicted RBP14.03□□□□□ -0.16
RAB40B-202ENST00000538809 ACOT9Q9Y305 439 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 PCNX1Q96RV3 2341 aa14.03□□□□□ -0.16
RAB40B-202ENST00000538809 A0A087X1B8 175 aa14.02□□□□□ -0.17
RAB40B-202ENST00000538809 IGKV3D-11A0A0A0MRZ8 115 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms