RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CLEC2DQ9UHP7 191 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 F5H5T6 163 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 KDELR3O43731 214 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 HCN1O60741 890 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 CNR2P34972 360 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 HNRNPA0Q13151 305 aaKnown RBP17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 GPR142Q7Z601 462 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 TMC8Q8IU68 726 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 DUSP18Q8NEJ0 188 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 FAM46DQ8NEK8 389 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 FZD3Q9NPG1 666 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 PLEKHB1Q9UF11 243 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 PRSS21Q9Y6M0 314 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 OR5K3A6NET4 321 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 YY2O15391 372 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 HLA-DQB1P01920 261 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 OPN1SWP03999 348 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 TYMPP19971 482 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 OR1E2P47887 323 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 ZNF157P51786 506 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 KLHL6Q8WZ60 621 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 TMEM80Q96HE8 168 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 SUSD3Q96L08 255 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 TRIM45Q9H8W5 580 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 FLRT1Q9NZU1 646 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 C1orf226A1L170 272 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 C17orf102A2RUQ5 167 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 PDPK1O15530 556 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 ENTPD6O75354 484 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 LAMP1P11279 417 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 HMGCLP35914 325 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 CRISP1P54107 249 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 ZXDBP98169 803 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 RING1Q06587 406 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 HSPA14Q0VDF9 509 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 MLLT11Q13015 90 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 MAB21L1Q13394 359 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 FAAH2Q6GMR7 532 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 FRMPD2BQ6IN97 320 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 SDE2Q6IQ49 451 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 MZT2BQ6NZ67 158 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 LRRC70Q7Z2Q7 622 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 FBXL6Q8N531 539 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 SH3KBP1Q96B97 665 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 ZIC5Q96T25 663 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 COPS8Q99627 209 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 TINF2Q9BSI4 451 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 HTATIP2Q9BUP3 242 aa17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 POLR2J2Q9GZM3 115 aaKnown RBP17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 EIF3KQ9UBQ5 218 aaKnown RBP17.84■□□□□ 0.45
SFSWAP-207ENST00000538548 WWP2O00308 870 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 PCDH17O14917 1159 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 PRAMEF1O95521 474 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 HBQ1P09105 142 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 DGKKQ5KSL6 1271 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 FAM151BQ6UXP7 276 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 PHC2Q8IXK0 858 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 LAS2Q8IYD9 372 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 L3MBTL4Q8NA19 623 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 C19orf18Q8NEA5 215 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 DNAJA4Q8WW22 397 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 EID2BQ96D98 161 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 GPR63Q9BZJ6 419 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 ARL15Q9NXU5 204 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 SLC23A1Q9UHI7 598 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 NDRG2Q9UN36 371 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 MSL3P1P0C860 447 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 SSTR4P31391 388 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 LIMS1P48059 325 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 MAPK12P53778 367 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 RRAS2P62070 204 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 TAGLNQ01995 201 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 NCF4Q15080 339 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 CDKL4Q5MAI5 379 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 FRG2Q64ET8 278 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 KLHL17Q6TDP4 642 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 NAGSQ8N159 534 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 ATP6V1C2Q8NEY4 427 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 NPLOC4Q8TAT6 608 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 HYLS1Q96M11 299 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 FRG2BQ96QU4 278 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 DUSP26Q9BV47 211 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 ANKRA2Q9H9E1 313 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 PAK6Q9NQU5 681 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 ACER3Q9NUN7 267 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 MCUBQ9NWR8 336 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 TXNL4BQ9NX01 149 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 GLTPQ9NZD2 209 aa17.83■□□□□ 0.44
SFSWAP-207ENST00000538548 LAMA3Q16787 3333 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 SERTM1A2A2V5 107 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 PLD2O14939 933 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 MYL12BO14950 172 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 PCDH7O60245 1069 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 AP2A2O94973 939 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 MYL12AP19105 171 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 SLC9A3P48764 834 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 RPIAP49247 311 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 HMGA2P52926 109 aa17.82■□□□□ 0.44
SFSWAP-207ENST00000538548 RAB25P57735 213 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms