RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
DDB1-212ENST00000538470 PDIA2Q13087 525 aaKnown RBP8.09□□□□□ -1.11
DDB1-212ENST00000538470 RCN2Q14257 317 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 RBBP5Q15291 538 aaKnown RBP8.09□□□□□ -1.11
DDB1-212ENST00000538470 TSNQ15631 228 aaKnown RBP8.09□□□□□ -1.11
DDB1-212ENST00000538470 TOR1AIP1Q5JTV8 583 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 CDKL4Q5MAI5 379 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 SPPL2CQ8IUH8 684 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 SCUBE1Q8IWY4 988 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 MCEMP1Q8IX19 187 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 KLHL7Q8IXQ5 586 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 KRT78Q8N1N4 520 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 CA13Q8N1Q1 262 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 KIF2BQ8N4N8 673 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 AMER2Q8N7J2 671 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 BBOF1Q8ND07 529 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 FBXO36Q8NEA4 188 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 NFAM1Q8NET5 270 aaPredicted RBP8.09□□□□□ -1.11
DDB1-212ENST00000538470 B3GNT7Q8NFL0 401 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 CREB3L4Q8TEY5 395 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 CDKL2Q92772 493 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 RHBDF1Q96CC6 855 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 TSPAN17Q96FV3 270 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 VMP1Q96GC9 406 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 FAR2Q96K12 515 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 TRIM51Q9BSJ1 452 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 MCMBPQ9BTE3 642 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 DEFB126Q9BYW3 111 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 DERL2Q9GZP9 239 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 CNOT10Q9H9A5 744 aaKnown RBP8.09□□□□□ -1.11
DDB1-212ENST00000538470 GPAMQ9HCL2 828 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 MOCS1Q9NZB8 636 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 RNF14Q9UBS8 474 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 SH3BGRL2Q9UJC5 107 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 TINAGQ9UJW2 476 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 PPIEQ9UNP9 301 aaKnown RBP8.09□□□□□ -1.11
DDB1-212ENST00000538470 MRPS33Q9Y291 106 aaKnown RBP8.09□□□□□ -1.11
DDB1-212ENST00000538470 PSAT1Q9Y617 370 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 SAR1BQ9Y6B6 198 aa8.09□□□□□ -1.11
DDB1-212ENST00000538470 PHF3Q92576 2039 aaKnown RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 CCDC168Q8NDH2 2452 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 TRBV11-1A0A0K0K1C0 115 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 EFCAB8A8MWE9 144 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 NPIPA5E9PKD4 350 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 E9PLN8 166 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 CLDN4O14493 209 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 PRRG2O14669 202 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 TFECO14948 347 aaPredicted RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 EIF3HO15372 352 aaKnown RBP eCLIP8.08□□□□□ -1.12
DDB1-212ENST00000538470 ASNA1O43681 348 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 B3GALT2O43825 422 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 H2AFYO75367 372 aaKnown RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 CLEC3AO75596 197 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 CLDN14O95500 239 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 B3GALT4O96024 378 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 PRF1P14222 555 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 ABOP16442 354 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 SAT1P21673 171 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 ELAVL4P26378 380 aaKnown RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 GRNP28799 593 aaKnown RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 HNF4AP41235 474 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 PAFAH1B1P43034 410 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 PGGT1BP53609 377 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 HSD17B7P56937 341 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 RAB38P57729 211 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 ATP6V0D1P61421 351 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 BTG2P78543 158 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 POU4F1Q01851 419 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
DDB1-212ENST00000538470 ZNF460Q14592 562 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 FASTKD3Q14CZ7 662 aaKnown RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 TGFBIQ15582 683 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 MAPKAPK3Q16644 382 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 ADPRMQ3LIE5 342 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 HP1BP3Q5SSJ5 553 aaPredicted RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 TRIM40Q6P9F5 258 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 TMIGD1Q6UXZ0 262 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 SYT10Q6XYQ8 523 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 SLCO4C1Q6ZQN7 724 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 CREG2Q8IUH2 290 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 GPALPP1Q8IXQ4 340 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 SRRM1Q8IYB3 904 aaKnown RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 ZNF595Q8IYB9 648 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 CYP4X1Q8N118 509 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 APCDD1LQ8NCL9 501 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 MS4A6EQ96DS6 147 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 TRIM44Q96DX7 344 aaPredicted RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 C16orf45Q96MC5 204 aaPredicted RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 PWWP2AQ96N64 755 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 VKORC1Q9BQB6 163 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 CCDC77Q9BR77 488 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 PHACTR1Q9C0D0 580 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 AICDAQ9GZX7 198 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 TSPAN10Q9H1Z9 355 aaPredicted RBP8.08□□□□□ -1.12
DDB1-212ENST00000538470 RHBGQ9H310 441 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 KLHL31Q9H511 634 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 ADAP2Q9NPF8 381 aa8.08□□□□□ -1.12
DDB1-212ENST00000538470 NECTIN3Q9NQS3 549 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms