RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 OR6C74A6NCV1 312 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 UQCRC2P22695 453 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 DCKP27707 260 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 SLC18A1P54219 525 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 TAS2R43P59537 309 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 OLIG2Q13516 323 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 DCAF12L1Q5VU92 463 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 PQLC3Q8N755 202 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 TMED9Q9BVK6 235 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 POLDIP3Q9BY77 421 aaKnown RBP16.23■□□□□ 0.19
SCARB1-205ENST00000538291 ENY2Q9NPA8 101 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 STYXL1Q9Y6J8 313 aa16.23■□□□□ 0.19
SCARB1-205ENST00000538291 XRCC1P18887 633 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 SLC15A1P46059 708 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 BBS10Q8TAM1 723 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 DAZLQ92904 295 aaKnown RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 HSPBAP1Q96EW2 488 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 AIFM2Q9BRQ8 373 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 PELOQ9BRX2 385 aaKnown RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 ARHGAP39Q9C0H5 1083 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 SLC6A15Q9H2J7 730 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 FMN2Q9NZ56 1722 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 A0A1W2PPL8 197 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF487B1APH4 448 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 NPIPA2E9PIF3 369 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 NPIPA3F8WFD2 350 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 HCRTR2O43614 444 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 NPPAP01160 153 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 JUNDP17535 347 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 ATF6P18850 670 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 CYBRD1Q53TN4 286 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 CWF19L1Q69YN2 538 aaKnown RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 SLC44A3Q8N4M1 653 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 SLC22A4Q9H015 551 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 BRF2Q9HAW0 419 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 MPC1LP0DKB6 136 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 C1GALT1C1LP0DN25 315 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 STK19P49842 368 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 PTPRCAPQ14761 206 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 TRIB2Q92519 343 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 GPR62Q9BZJ7 368 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 C8orf33Q9H7E9 229 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 TIGARQ9NQ88 270 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 C14orf166Q9Y224 244 aaKnown RBP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 KLHL33A6NCF5 533 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 APBB3O95704 486 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 IQCF3P0C7M6 154 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.22■□□□□ 0.19
SCARB1-205ENST00000538291 BAIAP2Q9UQB8 552 aa16.22■□□□□ 0.19
SCARB1-205ENST00000538291 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 KLF11O14901 512 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF84P51523 738 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 MAZP56270 477 aaKnown RBP16.21■□□□□ 0.19
SCARB1-205ENST00000538291 EPGNQ6UW88 154 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 SLC36A4Q6YBV0 504 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 TIFABQ6ZNK6 161 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 ASB18Q6ZVZ8 466 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF283Q8N7M2 679 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 TGM7Q96PF1 710 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 ITPAQ9BY32 194 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 EIF3KQ9UBQ5 218 aaKnown RBP16.21■□□□□ 0.19
SCARB1-205ENST00000538291 APOBEC3BQ9UH17 382 aaKnown RBP16.21■□□□□ 0.19
SCARB1-205ENST00000538291 MGAT4BQ9UQ53 548 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 C1orf61Q13536 156 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF678Q5SXM1 525 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 GNPDA2Q8TDQ7 276 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 OSBPL7Q9BZF2 842 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF224Q9NZL3 707 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 HCN4Q9Y3Q4 1203 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 PCDHGA10Q9Y5H3 936 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 C2orf92A0A1B0GVN3 265 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 M0R2N6 131 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 SLC33A1O00400 549 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-205ENST00000538291 AXIN1O15169 862 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 KCNC1P48547 511 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 NUDT6P53370 316 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 GPX6P59796 221 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 ACSBG2Q5FVE4 666 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF572Q7Z3I7 529 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-205ENST00000538291 OR5P2Q8WZ92 322 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 WDR6Q9NNW5 1121 aaKnown RBP16.21■□□□□ 0.19
SCARB1-205ENST00000538291 PDLIM1O00151 329 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 DFNA5O60443 496 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 DSG2Q14126 1118 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 TMPPEQ6ZT21 453 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 CCDC116Q8IYX3 515 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 RAB8BQ92930 207 aa16.21■□□□□ 0.19
SCARB1-205ENST00000538291 TEX13DA0A0J9YY54 714 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-205ENST00000538291 LOC100130705A0A1B0GUX0 176 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 KANTRA0A1W2PQU2 76 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 CDC123O75794 336 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-205ENST00000538291 FECHP22830 423 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 HERV-K104P61576 105 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 PLCXD2Q0VAA5 305 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 ODF4Q2M2E3 257 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 SPATS1Q496A3 300 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 ANKRD26P1Q6NSI1 321 aa16.2■□□□□ 0.18
SCARB1-205ENST00000538291 GALNT15Q8N3T1 639 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms