RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SOCS6O14544 535 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 CHST10O43529 356 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 TMPRSS11DO60235 418 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 TRIM13O60858 407 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 BMP10O95393 424 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 ESRRBO95718 433 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 OTCP00480 354 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 JUNP05412 331 aaKnown RBP12.36□□□□□ -0.43
CHFR-216ENST00000538235 ZGLP1P0C6A0 271 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 CCNYL3P0C7X3 344 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 CXCR2P25025 360 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 BSGP35613 385 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 ARL1P40616 181 aaPredicted RBP12.36□□□□□ -0.43
CHFR-216ENST00000538235 TMPRSS3P57727 454 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 BTN3A2P78410 334 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 GALNT1Q10472 559 aaPredicted RBP12.36□□□□□ -0.43
CHFR-216ENST00000538235 CHAF1BQ13112 559 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 ABRAXAS2Q15018 415 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 DEPDC1Q5TB30 811 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 KHDRBS2Q5VWX1 349 aaKnown RBP12.36□□□□□ -0.43
CHFR-216ENST00000538235 PRMT9Q6P2P2 845 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 LRRC69Q6ZNQ3 347 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 LANCL3Q6ZV70 420 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 OR2Y1Q8NGV0 311 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 OR2T11Q8NH01 316 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 OR51Q1Q8NH59 317 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 TSLPQ969D9 159 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 COL26A1Q96A83 441 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 PEX11GQ96HA9 241 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 SORT1Q99523 831 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 MRPL1Q9BYD6 325 aaKnown RBP12.36□□□□□ -0.43
CHFR-216ENST00000538235 TRIM55Q9BYV6 548 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 ACPTQ9BZG2 426 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 REXO4Q9GZR2 422 aaKnown RBP12.36□□□□□ -0.43
CHFR-216ENST00000538235 VIPAS39Q9H9C1 493 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 ANKHQ9HCJ1 492 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 KCMF1Q9P0J7 381 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 MAP4K5Q9Y4K4 846 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 CCL27Q9Y4X3 112 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 HS3ST3B1Q9Y662 390 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 CROCCQ5TZA2 2017 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 A0A1W2PS29 197 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 CDC14CA4D256 554 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 WASHC1A8K0Z3 465 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 C9J4A7 227 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 TXNDC9O14530 226 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 CDC123O75794 336 aaPredicted RBP12.35□□□□□ -0.43
CHFR-216ENST00000538235 DNAJB5O75953 348 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 SCELO95171 688 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 GBAP04062 536 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 AGXTP21549 392 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 BGNP21810 368 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 GSTM2P28161 218 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 PIK3CBP42338 1070 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 XCR1P46094 333 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 HNRNPH2P55795 449 aaKnown RBP12.35□□□□□ -0.43
CHFR-216ENST00000538235 HMGCS1Q01581 520 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 RHAGQ02094 409 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 TBL3Q12788 808 aaKnown RBP12.35□□□□□ -0.43
CHFR-216ENST00000538235 ATP1A4Q13733 1029 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 NDUFA9Q16795 377 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 UGT8Q16880 541 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 UGT3A2Q3SY77 523 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 ARL13AQ5H913 290 aaPredicted RBP12.35□□□□□ -0.43
CHFR-216ENST00000538235 HDXQ7Z353 690 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 MRGPREQ86SM8 312 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 CUZD1Q86UP6 607 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 MMP21Q8N119 569 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 CNPY4Q8N129 248 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 TTLQ8NG68 377 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 MGARPQ8TDB4 240 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 PPP4R1Q8TF05 950 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 TTC9Q92623 222 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 ATP6V1E2Q96A05 226 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 KIAA1143Q96AT1 154 aaPredicted RBP12.35□□□□□ -0.43
CHFR-216ENST00000538235 C8orf44Q96CB5 159 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 CCDC126Q96EE4 140 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 ATP6V1G3Q96LB4 118 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 MAPKAP1Q9BPZ7 522 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 VN1R1Q9GZP7 353 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 IQCGQ9H095 443 aaKnown RBP12.35□□□□□ -0.43
CHFR-216ENST00000538235 WDR54Q9H977 334 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 GIMAP2Q9UG22 337 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 PCDHGA11Q9Y5H2 935 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 BOD1L1Q8NFC6 3051 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 CHD6Q8TD26 2715 aa12.35□□□□□ -0.43
CHFR-216ENST00000538235 A0A0A6YYD5 115 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 ARHGAP10A1A4S6 786 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 ZNF891A8MT65 544 aaPredicted RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 TM9SF1O15321 606 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 ALBP02768 609 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 CELA2AP08217 269 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 ATP5A1P25705 553 aaKnown RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 TPP2P29144 1249 aaPredicted RBP12.34□□□□□ -0.43
CHFR-216ENST00000538235 OTX2P32243 289 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 AVPR1BP47901 424 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 PKNOX1P55347 436 aa12.34□□□□□ -0.43
CHFR-216ENST00000538235 RAE1P78406 368 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms