RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PUM1Q14671 1186 aaKnown RBP eCLIP6.9□□□□□ -1.316e-7■■■□□ 16.1
MSH6-209ENST00000538136 C18orf63Q68DL7 685 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 GK5Q6ZS86 529 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 RNF44Q7L0R7 432 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 ABHD13Q7L211 337 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 SPRED1Q7Z699 444 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.9□□□□□ -1.31
MSH6-209ENST00000538136 FAM156AQ8NDB6 213 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 SUN3Q8TAQ9 357 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 SPPL2AQ8TCT8 520 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 ADAMTS15Q8TE58 950 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 DNASE2BQ8WZ79 361 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 RHBDF1Q96CC6 855 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 LRGUKQ96M69 825 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 GBP5Q96PP8 586 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 RAB11FIP5Q9BXF6 653 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 ZNF160Q9HCG1 818 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 NLGN3Q9NZ94 848 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 KLRF1Q9NZS2 232 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 EGFL7Q9UHF1 273 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 RUVBL1Q9Y265 456 aaKnown RBP6.9□□□□□ -1.31
MSH6-209ENST00000538136 HEMK1Q9Y5R4 338 aaPredicted RBP6.9□□□□□ -1.31
MSH6-209ENST00000538136 ABCA1O95477 2261 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 A0A1B0GTL3 188 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 CDX4O14627 284 aaPredicted RBP6.9□□□□□ -1.31
MSH6-209ENST00000538136 CTSVO60911 334 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 CBX6O95503 412 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 PEPDP12955 493 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 LBPP18428 481 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 ECHS1P30084 290 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 LSP1P33241 339 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 NR0B1P51843 470 aaKnown RBP6.9□□□□□ -1.31
MSH6-209ENST00000538136 E2F1Q01094 437 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 ISXQ2M1V0 245 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 CPTPQ5TA50 214 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 GPR180Q86V85 440 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 ENDOVQ8N8Q3 282 aaKnown RBP6.9□□□□□ -1.31
MSH6-209ENST00000538136 LINC01555Q8NAE3 123 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 PIWIL2Q8TC59 973 aaKnown RBP6.9□□□□□ -1.31
MSH6-209ENST00000538136 CAVIN3Q969G5 261 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 C19orf60Q96EN9 201 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 MESP1Q9BRJ9 268 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 EFCAB11Q9BUY7 163 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 SLC12A9Q9BXP2 914 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 ALOXE3Q9BYJ1 711 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 DERL2Q9GZP9 239 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 TFB2MQ9H5Q4 396 aaKnown RBP6.9□□□□□ -1.31
MSH6-209ENST00000538136 SH3GLB1Q9Y371 365 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 NSG1A0A0A6YYJ2 146 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 DYTNA2CJ06 578 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 B2RBV5 119 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 D6RAR5 112 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 GAPDHSO14556 408 aaPredicted RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 DFNA5O60443 496 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 PDE5AO76074 875 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 OPN1SWP03999 348 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 POU1F1P28069 291 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 ETV5P41161 510 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 SLC16A1P53985 500 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 PER3P56645 1201 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 NCALDP61601 193 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 ABHD17BQ5VST6 288 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 BROXQ5VW32 411 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 PLPP6Q8IY26 295 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 OR51Q1Q8NH59 317 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 RGMAQ96B86 450 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 APIPQ96GX9 242 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 RPF2Q9H7B2 306 aaKnown RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 THAP1Q9NVV9 213 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 MRPS2Q9Y399 296 aaKnown RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 PCDHGA5Q9Y5G8 931 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 PDCD11Q14690 1871 aaKnown RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 EME2A4GXA9 379 aaPredicted RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 TLCD2A6NGC4 264 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 RFXANKO14593 260 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 FAM87AP0C7U9 286 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 CAPZBP47756 277 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 HERVK_113P63132 956 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 GSTM4Q03013 218 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 ISLR2Q6UXK2 745 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 CEACAM20Q6UY09 585 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 NUDT13Q86X67 352 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 TRPV3Q8NET8 790 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 OR7A2PQ8NGA2 310 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 CEP70Q8NHQ1 597 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 ZCCHC14Q8WYQ9 949 aaKnown RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 DIO2Q92813 273 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 OR52B2Q96RD2 323 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 CCT8L2Q96SF2 557 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 NPAS2Q99743 824 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 TMEM121BQ9BXQ6 578 aaPredicted RBP6.89□□□□□ -1.31
MSH6-209ENST00000538136 ERVK-6Q9BXR3 956 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 OR52A5Q9H2C5 316 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 ANGPTL2Q9UKU9 493 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 TRIM33Q9UPN9 1127 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 A0A1W2PR77 199 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 GYG2O15488 501 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 G6PDP11413 515 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 NUDT1P36639 197 aa6.89□□□□□ -1.31
MSH6-209ENST00000538136 ERVK-8P63133 956 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms