RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 MANSC4A6NHS7 340 aaPredicted RBP13.5□□□□□ -0.25
CLPB-209ENST00000538039 SOX14O95416 240 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 PTTG1O95997 202 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 C8GP07360 202 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 OR56A5P0C7T3 313 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 POU1F1P28069 291 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 ETV3P41162 512 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 SEC23BQ15437 767 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 ZNF79Q15937 498 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 ATAD3CQ5T2N8 411 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 ABI3BPQ7Z7G0 1075 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 RBM45Q8IUH3 476 aaKnown RBP13.5□□□□□ -0.25
CLPB-209ENST00000538039 AMER2Q8N7J2 671 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 C2orf15Q8WU43 125 aaKnown RBP13.5□□□□□ -0.25
CLPB-209ENST00000538039 SLC6A18Q96N87 628 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 TAPBPLQ9BX59 468 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 ABCB8Q9NUT2 735 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 STOX2Q9P2F5 926 aaPredicted RBP13.5□□□□□ -0.25
CLPB-209ENST00000538039 GULP1Q9UBP9 304 aa13.5□□□□□ -0.25
CLPB-209ENST00000538039 TRBV4-1A0A0J9YWV2 114 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 GNG14A0A1W2PPG7 69 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 SERTM1A2A2V5 107 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 DPM1O60762 260 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 ENTPD6O75354 484 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 CCNKO75909 580 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 RPLP2P05387 115 aaKnown RBP13.49□□□□□ -0.25
CLPB-209ENST00000538039 CTSAP10619 480 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 IMPA1P29218 277 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 HNMTP50135 292 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 ZNF45Q02386 682 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 RETSATQ6NUM9 610 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 AGTRAPQ6RW13 159 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 LAX1Q8IWV1 398 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLPB-209ENST00000538039 ASB15Q8WXK1 588 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 FCGR1BQ92637 280 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 SLC35A5Q9BS91 424 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
CLPB-209ENST00000538039 SUV39H2Q9H5I1 410 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 CCDC59Q9P031 241 aaKnown RBP13.49□□□□□ -0.25
CLPB-209ENST00000538039 FTSJ1Q9UET6 329 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 DUSP12Q9UNI6 340 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 RUVBL1Q9Y265 456 aaKnown RBP13.49□□□□□ -0.25
CLPB-209ENST00000538039 V9GYH0 126 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 GOLGA4Q13439 2230 aaKnown RBP13.49□□□□□ -0.25
CLPB-209ENST00000538039 SOCS5O75159 536 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 SERPINA4P29622 427 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 SSTR4P31391 388 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 HTR3AP46098 478 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 SCARB2Q14108 478 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 TAF12Q16514 161 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 Q5BKY6 102 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 GAREM2Q75VX8 874 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 OLIG3Q7RTU3 272 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 AQP11Q8NBQ7 271 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 C11orf65Q8NCR3 313 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 OVCA2Q8WZ82 227 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 PKP4Q99569 1192 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 NUAK2Q9H093 628 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 ABCG4Q9H172 646 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 C11orf16Q9NQ32 467 aa13.49□□□□□ -0.25
CLPB-209ENST00000538039 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.48□□□□□ -0.25
CLPB-209ENST00000538039 TSPAN6O43657 245 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 TGFB1P01137 390 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 FHP07954 510 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 XCR1P46094 333 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 TLE2Q04725 743 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 CSTF3Q12996 717 aaKnown RBP13.48□□□□□ -0.25
CLPB-209ENST00000538039 CDKL4Q5MAI5 379 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 AGAP6Q5VW22 663 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 LIPJQ5W064 366 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 ZNF770Q6IQ21 691 aaPredicted RBP13.48□□□□□ -0.25
CLPB-209ENST00000538039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.48□□□□□ -0.254e-6■■■■□ 20.5
CLPB-209ENST00000538039 Q6ZVU0 165 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 COMTD1Q86VU5 262 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 LAS2Q8IYD9 372 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 LMLNQ96KR4 655 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 AGAP4Q96P64 663 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 LINC00597Q9H2U6 94 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 BTNL2Q9UIR0 455 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 A0A1W2PQ45 241 aaPredicted RBP13.48□□□□□ -0.25
CLPB-209ENST00000538039 A0A1W2PQY0 241 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 SAGE2PA6NJ88 616 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 CBLP22681 906 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 S100A5P33763 92 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 DMC1Q14565 340 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 FAM214AQ32MH5 1076 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 RSBN1Q5VWQ0 802 aaPredicted RBP13.48□□□□□ -0.25
CLPB-209ENST00000538039 PCSK9Q8NBP7 692 aaKnown RBP13.48□□□□□ -0.25
CLPB-209ENST00000538039 WDR36Q8NI36 951 aaKnown RBP13.48□□□□□ -0.25
CLPB-209ENST00000538039 ST6GAL2Q96JF0 529 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 MMP28Q9H239 520 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 ANKHQ9HCJ1 492 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 DNAJC27Q9NZQ0 273 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 REV3LO60673 3130 aa13.48□□□□□ -0.25
CLPB-209ENST00000538039 HOXC11O43248 304 aaPredicted RBP13.48□□□□□ -0.25
CLPB-209ENST00000538039 IGSF6O95976 241 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms