RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SYN1P17600 705 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 GABRB1P18505 474 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 WEE1P30291 646 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 PPM1AP35813 382 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 CHI3L1P36222 383 aaPredicted RBP13.72□□□□□ -0.21
USP44-203ENST00000537435 MMP12P39900 470 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 TAS2R50P59544 299 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 PDE7AQ13946 482 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 SLC5A12Q1EHB4 618 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 TRIM40Q6P9F5 258 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 SLC46A3Q7Z3Q1 461 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 SLC22A16Q86VW1 577 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 OXR1Q8N573 874 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 PSD2Q9BQI7 771 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 WRAP53Q9BUR4 548 aaKnown RBP13.72□□□□□ -0.21
USP44-203ENST00000537435 EFCAB11Q9BUY7 163 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 SPNS1Q9H2V7 528 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 EHD1Q9H4M9 534 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 TMEM38AQ9H6F2 299 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 DOCK6Q96HP0 2047 aa13.72□□□□□ -0.21
USP44-203ENST00000537435 PRAMEF33A0A0G2JMD5 474 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 ABHD14A-ACY1A0A1B0GW23 586 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 M0R129 80 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 PRAMEF10O60809 474 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 CXCL14O95715 111 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 ADORA3P0DMS8 318 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 POU2F1P14859 743 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 ITGA2P17301 1181 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 FUT4P22083 530 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 GRK5P34947 590 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 EIF2DP41214 584 aaKnown RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 EIF2B2P49770 351 aaKnown RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 EEF1A2Q05639 463 aaKnown RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 FOXD4Q12950 439 aaPredicted RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 ELOAQ14241 798 aaKnown RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 PRSS53Q2L4Q9 553 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 AGAP7PQ5VUJ5 663 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 FAM71E1Q6IPT2 247 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 CCDC80Q76M96 950 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 DSG4Q86SJ6 1040 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 LAS2Q8IYD9 372 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 GPR65Q8IYL9 337 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 DEPDC4Q8N2C3 294 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 STX19Q8N4C7 294 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 ZNF557Q8N988 423 aaPredicted RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 ERLEC1Q96DZ1 483 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 YME1L1Q96TA2 773 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 MMP27Q9H306 513 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 TDP1Q9NUW8 608 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 PCDH10Q9P2E7 1040 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 TMEM221A6NGB7 291 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 PCDH17O14917 1159 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 KLHL18O94889 574 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 KLK1P06870 262 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 SRPRAP08240 638 aaKnown RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 DBTP11182 482 aaKnown RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 SOAT1P35610 550 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 ZNF658BQ4V348 819 aaPredicted RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 COLEC12Q5KU26 742 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 USP43Q70EL4 1123 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 PARS2Q7L3T8 475 aaKnown RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 FBXO15Q8NCQ5 510 aaPredicted RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 DENND6BQ8NEG7 585 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 GEMIN6Q8WXD5 167 aaKnown RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 WDR34Q96EX3 536 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 COL21A1Q96P44 957 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 C6orf62Q9GZU0 229 aaPredicted RBP13.71□□□□□ -0.21
USP44-203ENST00000537435 ZNF556Q9HAH1 456 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 IMPAD1Q9NX62 359 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 TAS2R9Q9NYW1 312 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 DUSP12Q9UNI6 340 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 WNT6Q9Y6F9 365 aa13.71□□□□□ -0.21
USP44-203ENST00000537435 PTHP01270 115 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 RPLP0P05388 317 aaKnown RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 ADH1AP07327 375 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 XCR1P46094 333 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 ST3GAL4Q11206 333 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 GANABQ14697 944 aaKnown RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 CRB2Q5IJ48 1285 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 HIST2H2AA3Q6FI13 130 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 ERAP2Q6P179 960 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 KIAA0907Q7Z7F0 614 aaPredicted RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 NLRP8Q86W28 1048 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 TRAPPC5Q8IUR0 188 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 VN1R2Q8NFZ6 395 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 GTPBP3Q969Y2 492 aaKnown RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 SGPP1Q9BX95 441 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 GPBP1L1Q9HC44 474 aaPredicted RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 MYNNQ9NPC7 610 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 PAK6Q9NQU5 681 aaPredicted RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 ABCB10Q9NRK6 738 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 ACER3Q9NUN7 267 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 DKK3Q9UBP4 350 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 SLC6A14Q9UN76 642 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 PDE4DIPQ5VU43 2346 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 LOC100506127A0A0U1RQW1 187 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 A0A1W2PRB8 838 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 TLL1O43897 1013 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 MOSPD3O75425 235 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms