RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 IMPAD1Q9NX62 359 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 ADAMTSL1Q8N6G6 1762 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 CKMP06732 381 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 NCF1P14598 390 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 RAB3BP20337 219 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 DNAJA1P31689 397 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 PAN3Q58A45 887 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 FAM76BQ5HYJ3 339 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 HSDL2Q6YN16 418 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 TREX2Q9BQ50 279 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 MARVELD1Q9BSK0 173 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 GAREM1Q9H706 876 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 SPATA6Q9NWH7 488 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 TSPAN16Q9UKR8 245 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 KCNMB2Q9Y691 235 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 KDM4BO94953 1096 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 FPR1P21462 350 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 PIK3CGP48736 1102 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 TPI1P60174 286 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 STX4Q12846 297 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 GPR17Q13304 367 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 PWP1Q13610 501 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 TSNQ15631 228 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 ZDHHC21Q8IVQ6 265 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 OR8D4Q8NGM9 314 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 OR6P1Q8NGX9 317 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 USP7Q93009 1102 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 GPR78Q96P69 363 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 RBP7Q96R05 134 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 KATNBL1Q9H079 304 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 HDHD2Q9H0R4 259 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 GSTO2Q9H4Y5 243 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 AGO3Q9H9G7 860 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 POLG2Q9UHN1 485 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 PPIEQ9UNP9 301 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 PCDHGB7Q9Y5F8 929 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 NDUFS6O75380 124 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 RGS19P49795 217 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 MAZP56270 477 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 TAS2R39P59534 338 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 DCDC1P59894 354 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 GBX1Q14549 363 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 PTCHD3Q3KNS1 767 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 CERCAMQ5T4B2 595 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 NAPEPLDQ6IQ20 393 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 GCNT7Q6ZNI0 430 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 FAM181AQ8N9Y4 354 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SORBS1Q9BX66 1292 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 TNFRSF12AQ9NP84 129 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 PLCXD1Q9NUJ7 323 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 AIG1Q9NVV5 245 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 MED9Q9NWA0 146 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 DNAJC15Q9Y5T4 150 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 GPR45Q9Y5Y3 372 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 OR6C75A6NL08 312 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 TTLL8A6PVC2 850 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 PLA2G10O15496 165 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 FGF19O95750 216 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 STSP08842 583 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 TKTL1P51854 596 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 OR2T5Q6IEZ7 315 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SLC27A4Q6P1M0 643 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 DBX2Q6ZNG2 339 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 OR2T29Q8NH02 315 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 DNTTIP1Q9H147 329 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 AMBNQ9NP70 447 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 TMEM45AQ9NWC5 275 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 A0A1W2PQL4 384 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 ISM1B1AKI9 464 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SCAMP3O14828 347 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 LCN1P31025 176 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 OR1D2P34982 312 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 MAN2A2P49641 1150 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 DIO3P55073 304 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 UFM1P61960 85 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 IL18Q14116 193 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SMYD5Q6GMV2 418 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 C3P1Q6ZMU1 363 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 TMEM179BQ7Z7N9 219 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 DNAJC22Q8N4W6 341 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 C12orf45Q8N5I9 185 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF655Q8N720 491 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 GGHQ92820 318 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SCRN2Q96FV2 425 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 PBX4Q9BYU1 374 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SYNDIG1Q9H7V2 258 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 REEP1Q9H902 201 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SLAMF7Q9NQ25 335 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 CD207Q9UJ71 328 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 DUSP12Q9UNI6 340 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 SAMHD1Q9Y3Z3 626 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 PSMD3O43242 534 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 HMBSP08397 361 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 TGM4P49221 684 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 PGGT1BP53609 377 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 MBTD1Q05BQ5 628 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 ST3GAL4Q11206 333 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 NPRL3Q12980 569 aa10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 GLYR1Q49A26 553 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF678Q5SXM1 525 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms