RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MSH2P43246 934 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 EXT1Q16394 746 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 HIST2H2ACQ16777 129 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 B3GNTL1Q67FW5 361 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 HIST2H2AA3Q6FI13 130 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 ADNP2Q6IQ32 1131 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 ABHD17CQ6PCB6 329 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 CA13Q8N1Q1 262 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 EIF1ADQ8N9N8 165 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 DNAJB14Q8TBM8 379 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 M1APQ8TC57 530 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 UBE2E3Q969T4 207 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 SNRNP40Q96DI7 357 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 FAR2Q96K12 515 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 RBCK1Q9BYM8 510 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 ILKAPQ9H0C8 392 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 L2HGDHQ9H9P8 463 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 LUZP4Q9P127 313 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 PTGFRNQ9P2B2 879 aa16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 UTP20O75691 2785 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-205ENST00000537164 A0A088AWK7 358 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 IGHV3-20A0A0C4DH32 117 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 TCRBV16S1A1N1A0A5B0 115 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 RIPK2O43353 540 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 PRMT3O60678 531 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 UGDHO60701 494 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 RBP1P09455 135 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 ZNF10P21506 573 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 GCAP28676 217 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 SERPINB1P30740 379 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 TSFMP43897 325 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 BTN3A2P78410 334 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 TLR1Q15399 786 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 PFKFB4Q16877 469 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 TSNAXIP1Q2TAA8 658 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 PRR30Q53SZ7 412 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 SFT2D3Q587I9 215 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 RPUSD3Q6P087 351 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 TRIM40Q6P9F5 258 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 LINC00696Q6ZRV3 163 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 SIRT6Q8N6T7 355 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 OR7G3Q8NG95 312 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 ADAMTS18Q8TE60 1221 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 ZNF473Q8WTR7 871 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 TSLPQ969D9 159 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 LPAR4Q99677 370 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 MS4A8Q9BY19 250 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 VPS11Q9H270 941 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 MMP25Q9NPA2 562 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 PRDM9Q9NQV7 894 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 PRDM7Q9NQW5 492 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 ZNF358Q9NW07 568 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 FETUBQ9UGM5 382 aa16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 TNPO3Q9Y5L0 923 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-205ENST00000537164 ESPL1Q14674 2120 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 USP9YO00507 2555 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 EXOC1LA0A1B0GW35 172 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 POC1B-GALNT4F8VUJ3 575 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 PSMD12O00232 456 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 VPS4BO75351 444 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 SNRPAP09012 282 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 RHOXF2BP0C7M4 288 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 GFAPP14136 432 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 RUNX2Q13950 521 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 ZNF169Q14929 603 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 BTBD16Q32M84 506 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 LIPJQ5W064 366 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 GRHL2Q6ISB3 625 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 MED27Q6P2C8 311 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 PAPD4Q6PIY7 484 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 ADGRD1Q6QNK2 874 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 TIFABQ6ZNK6 161 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 CNPY4Q8N129 248 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 TEX9Q8N6V9 391 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 AMER2Q8N7J2 671 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 SRFBP1Q8NEF9 429 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 CCT6BQ92526 530 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 PTCHD1Q96NR3 888 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 SERINC2Q96SA4 455 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 RHOXF2Q9BQY4 288 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 ADGRE2Q9UHX3 823 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 TMCO1Q9UM00 188 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 VPS4AQ9UN37 437 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 MMACHCQ9Y4U1 282 aa16.15■□□□□ 0.18
SFSWAP-205ENST00000537164 HIVEP3Q5T1R4 2406 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 DYTNA2CJ06 578 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 TRIM49D1C9J1S8 452 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 FAM227AF5H4B4 570 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 E2F3O00716 465 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 B3GALT2O43825 422 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 B4GALT2O60909 372 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 SCELO95171 688 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 FAM153BP0C7A2 387 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 PIK3CBP42338 1070 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 PIK3CGP48736 1102 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 TNFSF10P50591 281 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 ARFIP1P53367 373 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 PLA2G16P53816 162 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 MTTPP55157 894 aa16.14■□□□□ 0.17
SFSWAP-205ENST00000537164 HSD17B7P56937 341 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms