RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SFT2D3Q587I9 215 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 B3GNTL1Q67FW5 361 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-206ENST00000536429 GRHL2Q6ISB3 625 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 MED27Q6P2C8 311 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 IGFL3Q6UXB1 125 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 ZNF793Q6ZN11 406 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 MYLK4Q86YV6 388 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-206ENST00000536429 LAS2Q8IYD9 372 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 EIF1ADQ8N9N8 165 aaKnown RBP12.38□□□□□ -0.43
PRKDC-206ENST00000536429 TMEM52Q8NDY8 209 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 PLPP5Q8NEB5 264 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 OR2L5Q8NG80 312 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 OR7G3Q8NG95 312 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 OR52B6Q8NGF0 335 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 SEC16BQ96JE7 1060 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 VPS50Q96JG6 964 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 AGAP4Q96P64 663 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 CDK15Q96Q40 435 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 MS4A8Q9BY19 250 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 IPPKQ9H8X2 491 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 NECTIN3Q9NQS3 549 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 RIC8BQ9NVN3 520 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 TMEM216Q9P0N5 145 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 PTGFRNQ9P2B2 879 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-206ENST00000536429 TBK1Q9UHD2 729 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 RNF11Q9Y3C5 154 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 ANGPTL3Q9Y5C1 460 aa12.38□□□□□ -0.43
PRKDC-206ENST00000536429 UBR5O95071 2799 aaPredicted RBP12.38□□□□□ -0.43
PRKDC-206ENST00000536429 A0A1B0GTL3 188 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 TTLL8A6PVC2 850 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 MAGEB17A8MXT2 336 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 OR7A17O14581 309 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 PCDH17O14917 1159 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 ZNF500O60304 480 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 TGFB1P01137 390 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 CYC1P08574 325 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 RNH1P13489 461 aaKnown RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 IL10P22301 178 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 SOX11P35716 441 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 SLCO1A2P46721 670 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 PIK3CGP48736 1102 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 DDX39BQ13838 428 aaKnown RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 HIST2H2ACQ16777 129 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 HIST2H2AA3Q6FI13 130 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 IGFL2Q6UWQ7 119 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 CUZD1Q86UP6 607 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 CYP4X1Q8N118 509 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 FAM47BQ8NA70 645 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 HUS1BQ8NHY5 278 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 UBLCP1Q8WVY7 318 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 PNPLA2Q96AD5 504 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 MIB2Q96AX9 1013 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 MTBPQ96DY7 904 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 FAR2Q96K12 515 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 PTCHD1Q96NR3 888 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 CSF3RQ99062 836 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 MRPL57Q9BQC6 102 aaKnown RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 TUBB6Q9BUF5 446 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 SORBS1Q9BX66 1292 aaKnown RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 MRPL46Q9H2W6 279 aaKnown RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 NOL11Q9H8H0 719 aaKnown RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 ACTR8Q9H981 624 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 ZBTB26Q9HCK0 441 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 PRDM7Q9NQW5 492 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 PLA2G3Q9NZ20 509 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 C19orf25Q9UFG5 118 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 PCTPQ9UKL6 214 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 CLDN16Q9Y5I7 305 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 V9GYY5 206 aaPredicted RBP12.37□□□□□ -0.43
PRKDC-206ENST00000536429 DOCK10Q96BY6 2186 aa12.37□□□□□ -0.43
PRKDC-206ENST00000536429 COL12A1Q99715 3063 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 NUP210LQ5VU65 1888 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 IGKV3D-11A0A0A0MRZ8 115 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 A0A1W2PPM1 405 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 SMIM23A6NLE4 172 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 A8MT66 165 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 STX16-NPEPL1H3BU86 382 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 TGFBR3LH3BV60 316 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 PPP6CO00743 305 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 STX16O14662 325 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 PRMT3O60678 531 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 SMIM24O75264 130 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 ETHE1O95571 254 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 F10P00742 488 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 PYGBP11216 843 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 TSPAN8P19075 237 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 PPP2R1BP30154 601 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 ST13P50502 369 aaKnown RBP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 NEK2P51955 445 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 LIM2P55344 173 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 OR4D2P58180 307 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 RPS13P62277 151 aaKnown RBP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 SKP1P63208 163 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 TRAF3Q13114 568 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 MFAP5Q13361 173 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms