RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CLDN4O14493 209 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 CLGNO14967 610 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 B3GALT2O43825 422 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 NEURL1O76050 574 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 B3GALT4O96024 378 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 S100BP04271 92 aaPredicted RBP12.29□□□□□ -0.44
RTN3-207ENST00000536011 SMIM10L1P0DMW3 83 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 ESRRAP11474 423 aaPredicted RBP12.29□□□□□ -0.44
RTN3-207ENST00000536011 ZNF24P17028 368 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 MAOAP21397 527 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 TPP2P29144 1249 aaPredicted RBP12.29□□□□□ -0.44
RTN3-207ENST00000536011 TRHRP34981 398 aaPredicted RBP12.29□□□□□ -0.44
RTN3-207ENST00000536011 SLC6A12P48065 614 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 ATP6V0D1P61421 351 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 HYAL2Q12891 473 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 SLBPQ14493 270 aaKnown RBP eCLIP12.29□□□□□ -0.44
RTN3-207ENST00000536011 TGFBIQ15582 683 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 MAPKAPK3Q16644 382 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 SLC25A25Q6KCM7 469 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 TRIM40Q6P9F5 258 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 XKRXQ6PP77 449 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 GALNTL5Q7Z4T8 443 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 MRGPRGQ86SM5 289 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.29□□□□□ -0.44
RTN3-207ENST00000536011 SHISA5Q8N114 240 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 CA13Q8N1Q1 262 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 POGLUT1Q8NBL1 392 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 CREB3L4Q8TEY5 395 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 ITLN2Q8WWU7 325 aaPredicted RBP12.29□□□□□ -0.44
RTN3-207ENST00000536011 CCT6BQ92526 530 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 SMIM10Q96HG1 83 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 FRMD6Q96NE9 622 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 HS3ST6Q96QI5 342 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 NPAS2Q99743 824 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 CPNE1Q99829 537 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 CCDC77Q9BR77 488 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 NT5DC2Q9H857 520 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 DNAJC11Q9NVH1 559 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 WHRNQ9P202 907 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 SH3BGRL2Q9UJC5 107 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 SNX24Q9Y343 169 aa12.29□□□□□ -0.44
RTN3-207ENST00000536011 LRIT2A6NDA9 550 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 NCF1BA6NI72 391 aaPredicted RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 NCF1CA8MVU1 366 aaPredicted RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 ERI3O43414 337 aaKnown RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 NME2P1O60361 137 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 CLEC3AO75596 197 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 GSTA2P09210 222 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 NCF1P14598 390 aaPredicted RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 STMN1P16949 149 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 AGAP20933 346 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 NME2P22392 152 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 HLCSP50747 726 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 CLCN2P51788 898 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 HSD17B7P56937 341 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 MLF1P58340 268 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 BTN3A2P78410 334 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 BTG2P78543 158 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 SRSF11Q05519 484 aaKnown RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 LAPTM5Q13571 262 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 PAGE2BQ5JRK9 111 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 SP5Q6BEB4 398 aaPredicted RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 SULT1C3Q6IMI6 304 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 BNC2Q6ZN30 1099 aaPredicted RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 CAPN12Q6ZSI9 719 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 CEP97Q8IW35 865 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 ARMC10Q8N2F6 343 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 GHDCQ8N2G8 530 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 KIF2BQ8N4N8 673 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 B3GNT7Q8NFL0 401 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 ANKRD49Q8WVL7 239 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 ERP44Q9BS26 406 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 HES7Q9BYE0 225 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 KLHL31Q9H511 634 aa12.28□□□□□ -0.44
RTN3-207ENST00000536011 TRIM45Q9H8W5 580 aaPredicted RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 COPS7BQ9H9Q2 264 aaPredicted RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 KLF13Q9Y2Y9 288 aaPredicted RBP12.28□□□□□ -0.44
RTN3-207ENST00000536011 CSMD1Q96PZ7 3565 aa12.27□□□□□ -0.44
RTN3-207ENST00000536011 NPIPA5E9PKD4 350 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 TP73O15350 636 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 MAN1A2O60476 641 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 DNAJB6O75190 326 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 MYO1DO94832 1006 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 CCDC166P0CW27 439 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 ABOP16442 354 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 PTGER4P35408 488 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 GGT5P36269 586 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 GP5P40197 560 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 GDF5P43026 501 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 RAB38P57729 211 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 SLC13A2Q13183 592 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 PDK4Q16654 411 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 HIST2H2ACQ16777 129 aaPredicted RBP12.27□□□□□ -0.45
RTN3-207ENST00000536011 HIST2H2AA3Q6FI13 130 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 MYO7BQ6PIF6 2116 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 Q6ZPB1 254 aaPredicted RBP12.27□□□□□ -0.45
RTN3-207ENST00000536011 CYS1Q717R9 158 aa12.27□□□□□ -0.45
RTN3-207ENST00000536011 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms