RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LIPAP38571 399 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 HNF4AP41235 474 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 PFN3P60673 137 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 ESCO2Q56NI9 601 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 SHQ1Q6PI26 577 aaKnown RBP17.25■□□□□ 0.35
RAB40C-203ENST00000535977 TMEM179BQ7Z7N9 219 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 VRK3Q8IV63 474 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 AMER2Q8N7J2 671 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 OR8J2Q8NGG1 315 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 APOLD1Q96LR9 279 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 INPP5KQ9BT40 448 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 ZSCAN5AQ9BUG6 496 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 SPATA9Q9BWV2 254 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 SLC6A13Q9NSD5 602 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 VPS29Q9UBQ0 182 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 RGS10O43665 173 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 NOS1APO75052 506 aaPredicted RBP17.25■□□□□ 0.35
RAB40C-203ENST00000535977 SMN1Q16637 294 aaKnown RBP17.25■□□□□ 0.35
RAB40C-203ENST00000535977 DOK6Q6PKX4 331 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 TMEM25Q86YD3 366 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 SYT12Q8IV01 421 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 KREMEN2Q8NCW0 462 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 ZNF540Q8NDQ6 660 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 PRRG3Q9BZD7 231 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 ABCG8Q9H221 673 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 NUFIP1Q9UHK0 495 aaKnown RBP17.25■□□□□ 0.35
RAB40C-203ENST00000535977 MKLN1Q9UL63 735 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 A3GALT2U3KPV4 340 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 OR5K3A6NET4 321 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 FGF18O76093 207 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 ITGAMP11215 1152 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 TACR1P25103 407 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 SLC9A3P48764 834 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 DEFB103AP81534 67 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 ZDHHC21Q8IVQ6 265 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 SETD9Q8NE22 299 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 OR2A12Q8NGT7 310 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 SLC38A4Q969I6 547 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 OR2A14Q96R47 310 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 BBS2Q9BXC9 721 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 GABARAPL1Q9H0R8 117 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 RNF208Q9H0X6 261 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 BRF2Q9HAW0 419 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 SCN3BQ9NY72 215 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 COQ3Q9NZJ6 369 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 LTBP2Q14767 1821 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
RAB40C-203ENST00000535977 TSPAN11A1L157 253 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 MITFO75030 526 aaPredicted RBP17.24■□□□□ 0.35
RAB40C-203ENST00000535977 PSIP1O75475 530 aaKnown RBP17.24■□□□□ 0.35
RAB40C-203ENST00000535977 EPN2O95208 641 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 GPX2P18283 190 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 GADD45AP24522 165 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 NNMTP40261 264 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 GPAT3Q53EU6 434 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 Q6ZVU0 165 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 RTL10Q7L3V2 364 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 CHST14Q8NCH0 376 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 GALNT6Q8NCL4 622 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 SLC7A6Q92536 515 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 IRF7Q92985 503 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 IL1RAPQ9NPH3 570 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 TMEFF2Q9UIK5 374 aaPredicted RBP17.24■□□□□ 0.35
RAB40C-203ENST00000535977 RWDD3Q9Y3V2 267 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 HSPE1-MOB4S4R3N1 261 aa17.24■□□□□ 0.35
RAB40C-203ENST00000535977 LEUTXA8MZ59 168 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 CLIC1O00299 241 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 FPGTO14772 594 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 TFECO14948 347 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-203ENST00000535977 CXCL14O95715 111 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 ITGA2P17301 1181 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 ASMTP46597 345 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 LRRC74AQ0VAA2 488 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 TOR2AQ5JU69 321 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 SPANXN2Q5MJ10 180 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 CPZQ66K79 652 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 ASTLQ6HA08 431 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-203ENST00000535977 OR8H2Q8N162 312 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 PANX1Q96RD7 426 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 ACAT2Q9BWD1 397 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 RNF167Q9H6Y7 350 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 DIABLOQ9NR28 239 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 SPATA6Q9NWH7 488 aaPredicted RBP17.23■□□□□ 0.35
RAB40C-203ENST00000535977 RAPGEFL1Q9UHV5 662 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 NEDD8-MDP1E9PL57 170 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 H0YIV9 168 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 GJA1P17302 382 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 PPIBP23284 216 aaKnown RBP17.23■□□□□ 0.35
RAB40C-203ENST00000535977 ITPKAP23677 461 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 RFX2P48378 723 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 CD83Q01151 205 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 MVKQ03426 396 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 ARHGAP15Q53QZ3 475 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 OR4F3Q6IEY1 312 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 KCTD20Q7Z5Y7 419 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 GALNT5Q7Z7M9 940 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 THOC6Q86W42 341 aaKnown RBP17.23■□□□□ 0.35
RAB40C-203ENST00000535977 ANKRD46Q86W74 232 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 OR4M1Q8NGD0 313 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 WDR20Q8TBZ3 569 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms