RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	UBIAD1	Q9Y5Z9	338 aa		4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.25	□□□□□ -1.73
ECHDC1-223	ENST00000534442	INTS1	Q8N201	2190 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MYH9	P35579	1960 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TRBC2	A0A5B9	178 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NEMP2	A6NFY4	417 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MAGEB17	A8MXT2	336 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	INPP4B	O15327	924 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ARHGEF9	O43307	516 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RGS14	O43566	566 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NDUFS7	O75251	213 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RPN1	P04843	607 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MYBL1	P10243	752 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ATF6	P18850	670 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	APOBEC1	P41238	236 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SMS	P52788	366 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CSNK2A1	P68400	391 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KEAP1	Q14145	624 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MYLK3	Q32MK0	819 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	HECTD3	Q5T447	861 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TECPR1	Q7Z6L1	1165 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LDB1	Q86U70	411 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NRROS	Q86YC3	692 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RASGEF1C	Q8N431	466 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ATAD1	Q8NBU5	361 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CSNK2A3	Q8NEV1	391 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SCFD1	Q8WVM8	642 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LPGAT1	Q92604	370 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MOAP1	Q96BY2	351 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LINC00615	Q96LM1	132 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LRFN5	Q96NI6	719 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DACH2	Q96NX9	599 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GFI1	Q99684	422 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	EDEM3	Q9BZQ6	932 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RTN4R	Q9BZR6	473 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TRIM6	Q9C030	488 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SLCO5A1	Q9H2Y9	848 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KCNK15	Q9H427	330 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	OPA3	Q9H6K4	179 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TMEM206	Q9H813	350 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MINDY3	Q9H8M7	445 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	IL36RN	Q9UBH0	155 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SH3BGRL2	Q9UJC5	107 aa		4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NCOA6	Q14686	2063 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-223	ENST00000534442	UNC13C	Q8NB66	2214 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TRAV19	A0A0A6YYK7	116 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	IGHV4-28	A0A0C4DH34	117 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DDX39A	O00148	427 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SPRY3	O43610	288 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CREG1	O75629	220 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CTAG2	O75638	210 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SLCO2B1	O94956	709 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CCNE2	O96020	404 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RPLP0	P05388	317 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZFY	P08048	801 aa	Predicted RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	QDPR	P09417	244 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	F8A1	P23610	371 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MC5R	P33032	325 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KIF5B	P33176	963 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MMP13	P45452	471 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MXI1	P50539	228 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	HNRNPH2	P55795	449 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KCNK10	P57789	538 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZXDB	P98169	803 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GPS2	Q13227	327 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KLF9	Q13886	244 aa	Predicted RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	C16orf72	Q14CZ0	275 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RABEP1	Q15276	862 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DECR1	Q16698	335 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PRTG	Q2VWP7	1150 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	PAPPA-AS1	Q5QFB9	102 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CENPP	Q6IPU0	288 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	KRT80	Q6KB66	452 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GALNTL5	Q7Z4T8	443 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CCDC190	Q86UF4	302 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	HPS6	Q86YV9	775 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GALNT13	Q8IUC8	556 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	DSEL	Q8IZU8	1212 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TC2N	Q8N9U0	490 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RBM15B	Q8NDT2	890 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	OR2AK2	Q8NG84	335 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	HMGCLL1	Q8TB92	370 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	LRRC15	Q8TF66	581 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	NAT6	Q93015	286 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ZNF653	Q96CK0	615 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	ORAI1	Q96D31	301 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CPB2	Q96IY4	423 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	FEM1A	Q9BSK4	669 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	CXCL16	Q9H2A7	254 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	MMP27	Q9H306	513 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	GOLPH3L	Q9H4A5	285 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	RPF1	Q9H9Y2	349 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	SGK2	Q9HBY8	427 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	TRMT1	Q9NXH9	659 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	HAO2	Q9NYQ3	351 aa		4.23	□□□□□ -1.73
ECHDC1-223	ENST00000534442	STMN3	Q9NZ72	180 aa		4.23	□□□□□ -1.73

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