RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 MYBL2P10244 700 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 EDN3P14138 238 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 CRABP2P29373 138 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 KCNC1P48547 511 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 PLA2G16P53816 162 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 KCNK10P57789 538 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 SLC26A5P58743 744 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 PMP22Q01453 160 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 OC90Q02509 493 aaPredicted RBP9.8□□□□□ -0.84
CAPN1-225ENST00000533704 IRF8Q02556 426 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 DLG1Q12959 904 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 CHIT1Q13231 466 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 NAB1Q13506 487 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 DOC2AQ14183 400 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 HIST2H2ACQ16777 129 aaPredicted RBP9.8□□□□□ -0.84
CAPN1-225ENST00000533704 MEP1AQ16819 746 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 WHAMMP3Q1A5X7 153 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 ZNF766Q5HY98 468 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 ACER2Q5QJU3 275 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 MROH9Q5TGP6 573 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 HIST2H2AA3Q6FI13 130 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 RPUSD3Q6P087 351 aaKnown RBP9.8□□□□□ -0.84
CAPN1-225ENST00000533704 TRIM40Q6P9F5 258 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 QSOX2Q6ZRP7 698 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 KIF2BQ8N4N8 673 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 SLC5A8Q8N695 610 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 FAM47BQ8NA70 645 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 PDPRQ8NCN5 879 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 STAG3L4Q8TBR4 150 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 KCTD4Q8WVF5 259 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 IFT81Q8WYA0 676 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 NXNL1Q96CM4 212 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 MS4A6EQ96DS6 147 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 UBXN10Q96LJ8 280 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 TAAR6Q96RI8 345 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 BARD1Q99728 777 aaKnown RBP9.8□□□□□ -0.84
CAPN1-225ENST00000533704 UTP23Q9BRU9 249 aaKnown RBP9.8□□□□□ -0.84
CAPN1-225ENST00000533704 RNF32Q9H0A6 362 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 MMP25Q9NPA2 562 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 NUDT4Q9NZJ9 180 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 ACOT9Q9Y305 439 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 ASB1Q9Y576 335 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 EML6Q6ZMW3 1958 aa9.8□□□□□ -0.84
CAPN1-225ENST00000533704 A0A088AWK7 358 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 LRIT2A6NDA9 550 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 GABRR3A8MPY1 467 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PRAMEF4O60810 478 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 CLEC3AO75596 197 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 RASAL1O95294 804 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 DDAH2O95865 285 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 LTA4HP09960 611 aaKnown RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 SMIM10L1P0DMW3 83 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PCNAP12004 261 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 ZNF10P21506 573 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 CERS1P27544 350 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PHBP35232 272 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 GGT5P36269 586 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 MSH2P43246 934 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 IRF9Q00978 393 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 SLC13A2Q13183 592 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 TUBA3CQ13748 450 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 RUNX2Q13950 521 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 C4orf17Q53FE4 359 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PAGE2BQ5JRK9 111 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 CDKL4Q5MAI5 379 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PRAMEF9Q5VWM5 478 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 TUBA3EQ6PEY2 450 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 GFRALQ6UXV0 394 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 LRRC70Q7Z2Q7 622 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 CLNKQ7Z7G1 428 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 ISCA2Q86U28 154 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 MYLK4Q86YV6 388 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 SREK1Q8WXA9 508 aaKnown RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 NR4A3Q92570 626 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PTCD3Q96EY7 689 aaKnown RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 SMIM10Q96HG1 83 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 SIGLEC12Q96PQ1 595 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 F2RL3Q96RI0 385 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 NPAS2Q99743 824 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 SLX1AQ9BQ83 275 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 EFCAB11Q9BUY7 163 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 HES7Q9BYE0 225 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 CD244Q9BZW8 370 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PITHD1Q9GZP4 211 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 REXO4Q9GZR2 422 aaKnown RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 CDCP1Q9H5V8 836 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 NT5DC2Q9H857 520 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 CLK4Q9HAZ1 481 aaKnown RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 NECTIN3Q9NQS3 549 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PRTFDC1Q9NRG1 225 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PNO1Q9NRX1 252 aaKnown RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 IGSF5Q9NSI5 407 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 ZDHHC18Q9NUE0 388 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 NINJ2Q9NZG7 142 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 OPTCQ9UBM4 332 aa9.79□□□□□ -0.84
CAPN1-225ENST00000533704 MTRF1LQ9UGC7 380 aaKnown RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 PTBP2Q9UKA9 531 aaKnown RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 ZNF490Q9ULM2 529 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-225ENST00000533704 ANGPTL3Q9Y5C1 460 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms