RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 BTN3A3O00478 584 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 ITM2AO43736 263 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 KLK8O60259 260 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 MLYCDO95822 493 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 HPP00738 406 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 ALAS2P22557 587 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC1A6P48664 564 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 ABCE1P61221 599 aaKnown RBP10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 FOLH1Q04609 750 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 FOXD4Q12950 439 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 TGFBIQ15582 683 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 PPP1R3AQ16821 1122 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 UNC50Q53HI1 259 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 Q6ZPB1 254 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 FAM47EQ6ZV65 393 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 FRA10AC1Q70Z53 315 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 OVCH1Q7RTY7 1134 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 CPLX4Q7Z7G2 160 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 SPPL2CQ8IUH8 684 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 TMEM151BQ8IW70 566 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 KBTBD2Q8IY47 623 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 C19orf47Q8N9M1 422 aaKnown RBP10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 OR11G2Q8NGC1 345 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 SPATA3Q8NHX4 192 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 THAP3Q8WTV1 239 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 CCT8L2Q96SF2 557 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 TRIM54Q9BYV2 358 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC26A1Q9H2B4 701 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 PARVBQ9HBI1 364 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 FAM60AQ9NP50 221 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 DLL4Q9NR61 685 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 FGFR1OP2Q9NVK5 253 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 THAP1Q9NVV9 213 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 PLA2G3Q9NZ20 509 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 NUDT4Q9NZJ9 180 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 PDE10AQ9Y233 779 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 RPH3AQ9Y2J0 694 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZNF835Q9Y2P0 537 aa10.72□□□□□ -0.69
TRAPPC4-213ENST00000533149 LRRC14BA6NHZ5 514 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 NCF1BA6NI72 391 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 NCF1CA8MVU1 366 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 TMEM114B3SHH9 223 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 STX16-NPEPL1H3BU86 382 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 STX16O14662 325 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 PRAMEF2O60811 474 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 EDF1O60869 148 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 SNNO75324 88 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 H2AFYO75367 372 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 PSIP1O75475 530 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 LYPLA1O75608 230 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 GUCA1CO95843 209 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 ONECUT2O95948 504 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 S100BP04271 92 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 ENO2P09104 434 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 HIST1H2AGP0C0S8 130 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 NCF1P14598 390 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 HIST1H2ADP20671 130 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 ACADLP28330 430 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 ALDH18A1P54886 795 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 SP140Q13342 867 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 PCOLCEQ15113 449 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 TERF2Q15554 542 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 NKG7Q16617 165 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 C18orf21Q32NC0 220 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 KRTCAP3Q53RY4 240 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 CFAP157Q5JU67 520 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZNF678Q5SXM1 525 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 BIVMQ86UB2 503 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 EID3Q8N140 333 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 MCOLN3Q8TDD5 553 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 PHF10Q8WUB8 498 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 L3HYPDHQ96EM0 354 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 HIST1H2AHQ96KK5 128 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 FOPNLQ96NB1 174 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 TMEM237Q96Q45 408 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 SPSB2Q99619 263 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 MDFIQ99750 246 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 HIST1H2AJQ99878 128 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 EGFL8Q99944 293 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZNF559Q9BR84 538 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 H2AFJQ9BTM1 129 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 C20orf27Q9GZN8 174 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 DRC3Q9H069 523 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 FAM107BQ9H098 131 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 OR52A5Q9H2C5 316 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC22A11Q9NSA0 550 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 ACTR10Q9NZ32 417 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 COQ3Q9NZJ6 369 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 PTGFRNQ9P2B2 879 aa10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 PTBP2Q9UKA9 531 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-213ENST00000533149 ANKRD12Q6UB98 2062 aa10.71□□□□□ -0.7
TRAPPC4-213ENST00000533149 CACNA1CQ13936 2221 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 A0A1B0GX78 115 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 ARHGEF33A8MVX0 844 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 TAPBPO15533 448 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 RRP9O43818 475 aaKnown RBP10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 NPHS1O60500 1241 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 SUPT7LO94864 414 aa10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 SIX3O95343 332 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-213ENST00000533149 CATP04040 527 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms