RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ETNK1Q9HBU6 452 aa11.6□□□□□ -0.55
CAPN1-223ENST00000533079 CHRAC1Q9NRG0 131 aa11.6□□□□□ -0.55
CAPN1-223ENST00000533079 PNPLA3Q9NST1 481 aa11.6□□□□□ -0.55
CAPN1-223ENST00000533079 KLHL42Q9P2K6 505 aa11.6□□□□□ -0.55
CAPN1-223ENST00000533079 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
CAPN1-223ENST00000533079 GTF3C1Q12789 2109 aa11.6□□□□□ -0.55
CAPN1-223ENST00000533079 TCRBV16S1A1N1A0A5B0 115 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 FEZF1A0PJY2 475 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 RRP9O43818 475 aaKnown RBP11.59□□□□□ -0.55
CAPN1-223ENST00000533079 ZBTB14O43829 449 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 ITGA10O75578 1167 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 SEC31AO94979 1220 aaKnown RBP11.59□□□□□ -0.55
CAPN1-223ENST00000533079 SYF2O95926 243 aaKnown RBP11.59□□□□□ -0.55
CAPN1-223ENST00000533079 IGHG3P01860 377 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 STATHP02808 62 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 INHBBP09529 407 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 MPC1LP0DKB6 136 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 ENO3P13929 434 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-223ENST00000533079 OGNP20774 298 aaKnown RBP11.59□□□□□ -0.55
CAPN1-223ENST00000533079 CCND1P24385 295 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 IMPA1P29218 277 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 FMO4P31512 558 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 GRIA1P42261 906 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 CLCN2P51788 898 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 GPR85P60893 370 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 TBPL1P62380 186 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 KCNJ11Q14654 390 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 GXYLT1Q4G148 440 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 ACSBG2Q5FVE4 666 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 CAPN13Q6MZZ7 669 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-223ENST00000533079 TTC27Q6P3X3 843 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 CDC20BQ86Y33 519 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 AFAP1L2Q8N4X5 818 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 KCT2Q8NC54 265 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 PSD4Q8NDX1 1056 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 FAM222BQ8WU58 562 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 SLC13A3Q8WWT9 602 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 ARSGQ96EG1 525 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 SMC6Q96SB8 1091 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 ACBD3Q9H3P7 528 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 EIF2B3Q9NR50 452 aaKnown RBP11.59□□□□□ -0.55
CAPN1-223ENST00000533079 ABCF3Q9NUQ8 709 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 FAM215AQ9Y5M1 114 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 HEATR5BQ9P2D3 2071 aa11.59□□□□□ -0.55
CAPN1-223ENST00000533079 IGKV3D-11A0A0A0MRZ8 115 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 A0A0G2JNJ9 132 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 A0A1B0GVC2 190 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 SYNDIG1LA6NDD5 238 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 NPIPA2E9PIF3 369 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 NPIPA3F8WFD2 350 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 GALR3O60755 368 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-223ENST00000533079 SASH3O75995 380 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 PDE9AO76083 593 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 ATE1O95260 518 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 APRTP07741 180 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 GLI4P10075 376 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 ECHS1P30084 290 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 HOXC12P31275 282 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 SSR4P51571 173 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 PPIAP62937 165 aaKnown RBP11.58□□□□□ -0.56
CAPN1-223ENST00000533079 PLGLB1Q02325 96 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 CAV1Q03135 178 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 PWP1Q13610 501 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 BBS9Q3SYG4 887 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 RIPPLY2Q5TAB7 128 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 GK5Q6ZS86 529 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 SLC26A11Q86WA9 606 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 SHISA5Q8N114 240 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 APCDD1LQ8NCL9 501 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 BBOF1Q8ND07 529 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 ARMC2Q8NEN0 867 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 NFAM1Q8NET5 270 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-223ENST00000533079 B3GNT7Q8NFL0 401 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 ASB11Q8WXH4 323 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 PTCHD1Q96NR3 888 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 TSPYL1Q9H0U9 437 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 PRDM9Q9NQV7 894 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 RAB6BQ9NRW1 208 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 INTS10Q9NVR2 710 aaKnown RBP11.58□□□□□ -0.56
CAPN1-223ENST00000533079 CRIM1Q9NZV1 1036 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 WHRNQ9P202 907 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 Q9UFV3 132 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 FOXD3Q9UJU5 478 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-223ENST00000533079 NFU1Q9UMS0 254 aa11.58□□□□□ -0.56
CAPN1-223ENST00000533079 TRBV11-1A0A0K0K1C0 115 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 ZNF860A6NHJ4 632 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 GFYI3L273 518 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 EIF3FO00303 357 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-223ENST00000533079 AQP7O14520 342 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 LIASO43766 372 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 SUSD5O60279 629 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 GABRA1P14867 456 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 ALOX12P18054 663 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 ARNTP27540 789 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 CLCN7P51798 805 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 MRPS25P82663 173 aaKnown RBP11.57□□□□□ -0.56
CAPN1-223ENST00000533079 KEAP1Q14145 624 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 ARMC3Q5W041 872 aa11.57□□□□□ -0.56
CAPN1-223ENST00000533079 ZNF585AQ6P3V2 769 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms