RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 MAGEB17A8MXT2 336 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 SUPT3HB4E1H0 165 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 CHST10O43529 356 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 CCNT2O60583 730 aaKnown RBP15.69■□□□□ 0.1
PKP3-209ENST00000533069 SUPT3HO75486 399 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 CLEC3AO75596 197 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 WFS1O76024 890 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 ALDOAP04075 364 aaKnown RBP15.69■□□□□ 0.1
PKP3-209ENST00000533069 C2P06681 752 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 SMIM10L1P0DMW3 83 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 SOX11P35716 441 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 HNF4AP41235 474 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 RAB8AP61006 207 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 RHAGQ02094 409 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 LAPTM5Q13571 262 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 TLR1Q15399 786 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 TBCCQ15814 346 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 XKR6Q5GH73 641 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 TOR1AIP1Q5JTV8 583 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 B3GNTL1Q67FW5 361 aaPredicted RBP15.69■□□□□ 0.1
PKP3-209ENST00000533069 KLC3Q6P597 504 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 LANCL3Q6ZV70 420 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 ANKRD37Q7Z713 158 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 SRRM1Q8IYB3 904 aaKnown RBP15.69■□□□□ 0.1
PKP3-209ENST00000533069 CENPLQ8N0S6 344 aaPredicted RBP15.69■□□□□ 0.1
PKP3-209ENST00000533069 PLPP5Q8NEB5 264 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 DNAJB14Q8TBM8 379 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 BRIX1Q8TDN6 353 aaKnown RBP15.69■□□□□ 0.1
PKP3-209ENST00000533069 UBTD2Q8WUN7 234 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 PSMF1Q92530 271 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 GAL3ST3Q96A11 431 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 SMIM10Q96HG1 83 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 FAR2Q96K12 515 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 IQCGQ9H095 443 aaKnown RBP15.69■□□□□ 0.1
PKP3-209ENST00000533069 DCDC2Q9UHG0 476 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 PCDHGA10Q9Y5H3 936 aa15.69■□□□□ 0.1
PKP3-209ENST00000533069 TNRC6AQ8NDV7 1962 aaKnown RBP15.68■□□□□ 0.1
PKP3-209ENST00000533069 A0A088AWK7 358 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 A0A096LPK6 155 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 ANKDD1BA6NHY2 528 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 PSMD12O00232 456 aaPredicted RBP15.68■□□□□ 0.1
PKP3-209ENST00000533069 RNH1P13489 461 aaKnown RBP15.68■□□□□ 0.1
PKP3-209ENST00000533069 KRT4P19013 534 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 ZNF10P21506 573 aaPredicted RBP15.68■□□□□ 0.1
PKP3-209ENST00000533069 GMPRP36959 345 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 TSFMP43897 325 aaKnown RBP15.68■□□□□ 0.1
PKP3-209ENST00000533069 KCNC1P48547 511 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 MAGOHP61326 146 aaKnown RBP15.68■□□□□ 0.1
PKP3-209ENST00000533069 SLC18A2Q05940 514 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 DOC2AQ14183 400 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 ABRAXAS2Q15018 415 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 ACAP2Q15057 778 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 NSDHLQ15738 373 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 EXT1Q16394 746 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 HIST2H2ACQ16777 129 aaPredicted RBP15.68■□□□□ 0.1
PKP3-209ENST00000533069 TSNAXIP1Q2TAA8 658 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 PRR30Q53SZ7 412 aaPredicted RBP15.68■□□□□ 0.1
PKP3-209ENST00000533069 TTMPQ5BVD1 217 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 FBXO48Q5FWF7 155 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 PLAG1Q6DJT9 500 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 HIST2H2AA3Q6FI13 130 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 LINC00696Q6ZRV3 163 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 CUZD1Q86UP6 607 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 EXOC3L1Q86VI1 746 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 CYP4X1Q8N118 509 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 KCTD4Q8WVF5 259 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 ESAMQ96AP7 390 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 ARL8AQ96BM9 186 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 NXNL1Q96CM4 212 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 RBCK1Q9BYM8 510 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 KLHL31Q9H511 634 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 PTGFRNQ9P2B2 879 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 OPTCQ9UBM4 332 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 TEKT2Q9UIF3 430 aa15.68■□□□□ 0.1
PKP3-209ENST00000533069 MDC1Q14676 2089 aaKnown RBP15.67■□□□□ 0.1
PKP3-209ENST00000533069 DYTNA2CJ06 578 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 LRIT2A6NDA9 550 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 UBXN8O00124 270 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 COPEO14579 308 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 TM9SF1O15321 606 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 GLRA3O75311 464 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 CDC123O75794 336 aaPredicted RBP15.67■□□□□ 0.1
PKP3-209ENST00000533069 SEC24DO94855 1032 aaPredicted RBP15.67■□□□□ 0.1
PKP3-209ENST00000533069 KLHL2O95198 593 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 CASP2P42575 452 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 OLR1P78380 273 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 ARG2P78540 354 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 IRF9Q00978 393 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 IRF8Q02556 426 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 E2F2Q14209 437 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 ZNF169Q14929 603 aaPredicted RBP15.67■□□□□ 0.1
PKP3-209ENST00000533069 ADPRMQ3LIE5 342 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 QSOX2Q6ZRP7 698 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 SHISA5Q8N114 240 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 SIRT6Q8N6T7 355 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 ADAMTS18Q8TE60 1221 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 CCT6BQ92526 530 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 UBE2E3Q969T4 207 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 SNRNP40Q96DI7 357 aaKnown RBP15.67■□□□□ 0.1
PKP3-209ENST00000533069 MS4A6EQ96DS6 147 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms