RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 IFNA21P01568 189 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 CSN2P05814 226 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RHOP08100 348 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 S100A1P23297 94 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 OXTRP30559 389 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ARRB1P49407 418 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RAB15P59190 212 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 CDKL1Q00532 357 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 SEC23BQ15437 767 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ATP6AP1Q15904 470 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 SCGB2B2Q4G0G5 96 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF648Q5T619 568 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ATG9BQ674R7 924 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TUBA3EQ6PEY2 450 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RPS27LQ71UM5 84 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ZFAND4Q86XD8 727 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TICAM1Q8IUC6 712 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 IGDCC3Q8IVU1 814 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PEX13Q92968 403 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PPP1R14BQ96C90 147 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RAD9AQ99638 391 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 DCSTAMPQ9H295 470 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PTGES2Q9H7Z7 377 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TAS2R9Q9NYW1 312 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 KLHL21Q9UJP4 597 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 GPR34Q9UPC5 381 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 HTR3EA5X5Y0 456 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 BLOC1S5-TXNDC5H3BN57 136 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MATN2O00339 956 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 AHSA1O95433 338 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 IL33O95760 270 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 SCGB1D2O95969 90 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MT-ND5P03915 603 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 SYT16Q17RD7 645 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 FLYWCH1Q4VC44 716 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 SPANXN4Q5MJ08 99 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MLIPQ5VWP3 458 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MEDAGQ5VYS4 303 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 GPAT4Q86UL3 456 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TMEM125Q96AQ2 219 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RPF2Q9H7B2 306 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MVB12BQ9H7P6 319 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MKLN1Q9UL63 735 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PCDHB14Q9Y5E9 798 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 HEMK1Q9Y5R4 338 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TEX13CA0A0J9YWL9 993 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 FAAHO00519 579 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 CDRT1O95170 752 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 GJB5O95377 273 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 SYNGR4O95473 234 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 GBAP04062 536 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 HLA-DPB1P04440 258 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PFKLP17858 780 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 EIF1AXP47813 144 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RPS15AP62244 130 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MAD2L1BPQ15013 274 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ASB18Q6ZVZ8 466 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 SETD7Q8WTS6 366 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 BORCS6Q96GS4 357 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 C16orf70Q9BSU1 422 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TSSK6Q9BXA6 273 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TOR3AQ9H497 397 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 NSUN3Q9H649 340 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PCDHB16Q9NRJ7 776 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RNF186Q9NXI6 227 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 STOX2Q9P2F5 926 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 CLEC3AO75596 197 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 HPRP00739 348 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 DLDP09622 509 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 C1GALT1C1LP0DN25 315 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 IFI30P13284 250 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 GRIA2P42262 883 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 KCNC1P48547 511 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 VSX2P58304 361 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 NADK2Q4G0N4 442 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 KANK2Q63ZY3 851 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PAQR7Q86WK9 346 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF280BQ86YH2 543 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PHTF2Q8N3S3 785 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MFSD2AQ8NA29 543 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 GLIS1Q8NBF1 620 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 AIFM2Q9BRQ8 373 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TTYH2Q9BSA4 534 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ASB6Q9NWX5 421 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PLEKHA6Q9Y2H5 1048 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RBMX2Q9Y388 322 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 HCN4Q9Y3Q4 1203 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PCDHGB6Q9Y5F9 930 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 DOT1LQ8TEK3 1739 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 M0QX08 132 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 TLX2O43763 284 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 NUAK1O60285 661 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 EEDO75530 441 aaKnown RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 SNAPC5O75971 98 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 CH25HO95992 272 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 PVALBP20472 110 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 CD9P21926 228 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 KCNJ5P48544 419 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 PTPRCAPQ14761 206 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 RPL13AP3Q6NVV1 102 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms