RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TRNAU1APQ9NX07 287 aaKnown RBP4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 TAB2Q9NYJ8 693 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 MOSPD1Q9UJG1 213 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 FZD10Q9ULW2 581 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 DTX4Q9Y2E6 619 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 RNF215Q9Y6U7 377 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 CHD5Q8TDI0 1954 aa4.97□□□□□ -1.61
AMBRA1-209ENST00000529963 UNC13CQ8NB66 2214 aa4.96□□□□□ -1.61
AMBRA1-209ENST00000529963 NBASA2RRP1 2371 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 BSNQ9UPA5 3926 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 A0A1W2PQ67 120 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 TMEM202A6NGA9 273 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 EIF3CLB5ME19 914 aaKnown RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 STMND1H3BQB6 276 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 J3KR12 359 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 EEF2KO00418 725 aaKnown RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 PRAMEF11O60813 436 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 PALMO75781 387 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 CPNE6O95741 557 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 CYP4B1P13584 511 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ITIH1P19827 911 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 FBLP22087 321 aaKnown RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 NFKBIAP25963 317 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 TRIM23P36406 574 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 PGM1P36871 562 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ETV5P41161 510 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 POLD2P49005 469 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 CCR9P51686 369 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 MVDP53602 400 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ARF3P61204 181 aaPredicted RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 AP1S1P61966 158 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ARF1P84077 181 aaKnown RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 RHAGQ02094 409 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ILF3Q12906 894 aaKnown RBP eCLIP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 SRSF6Q13247 344 aaKnown RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 PEX6Q13608 980 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 THOC5Q13769 683 aaKnown RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ERV3-1Q14264 604 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 RFTN1Q14699 578 aaPredicted RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ETFDHQ16134 617 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 AMZ1Q400G9 498 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 FAM205BPQ63HN1 556 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 DCUN1D2Q6PH85 259 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 LRIG3Q6UXM1 1119 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 DPPA4Q7L190 304 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 MON1BQ7L1V2 547 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 VASH2Q86V25 355 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 PIM3Q86V86 326 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ZFAND4Q86XD8 727 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 CCDC112Q8NEF3 446 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 ANKRD20A12PQ8NF67 263 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 NEK11Q8NG66 645 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 NUS1Q96E22 293 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 MCEEQ96PE7 176 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 PCDHB18PQ96TA0 734 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 SEMA3CQ99985 751 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 CNPY3Q9BT09 278 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 GSDMCQ9BYG8 508 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 CCDC68Q9H2F9 335 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 LRRC19Q9H756 370 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 MRPL40Q9NQ50 206 aaKnown RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 PHPT1Q9NRX4 125 aaPredicted RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 SAMSN1Q9NSI8 373 aaKnown RBP4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 LAMP3Q9UQV4 416 aa4.96□□□□□ -1.62
AMBRA1-209ENST00000529963 DPPA5A6NC42 116 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 RHODO00212 210 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 DFFAO00273 331 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 PEX12O00623 359 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 TIPRLO75663 272 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 CCDC172P0C7W6 258 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 CCNB1P14635 433 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 ITGB6P18564 788 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 PSMA2P25787 234 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 ABCD3P28288 659 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 ALDH4A1P30038 563 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 KLK7P49862 253 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 MAZP56270 477 aaKnown RBP4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 RPL7AP62424 266 aaKnown RBP4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 SSBP2P81877 361 aaPredicted RBP4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 GALNT2Q10471 571 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 RALGDSQ12967 914 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 TRA2AQ13595 282 aaKnown RBP eCLIP4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 KRT31Q15323 416 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 MORN5Q5VZ52 161 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 KCTD16Q68DU8 428 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 PPP1R2P3Q6NXS1 205 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 PNCKQ6P2M8 343 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 R3HCC1LQ7Z5L2 792 aaKnown RBP4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 CCDC25Q86WR0 208 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 ANKRD13BQ86YJ7 626 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 CCL4L1Q8NHW4 92 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 ECHDC3Q96DC8 303 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 RNFT2Q96EX2 444 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 CELF6Q96J87 481 aaKnown RBP4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 AGPAT1Q99943 283 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 SLC25A18Q9H1K4 315 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 ADNPQ9H2P0 1102 aa4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 DHX35Q9H5Z1 703 aaKnown RBP4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 STN1Q9H668 368 aaKnown RBP4.95□□□□□ -1.62
AMBRA1-209ENST00000529963 SUDS3Q9H7L9 328 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms