RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 ZNF224Q9NZL3 707 aa3.24□□□□□ -1.89
AMBRA1-208ENST00000529558 ATP6V1HQ9UI12 483 aa3.24□□□□□ -1.89
AMBRA1-208ENST00000529558 KCNS2Q9ULS6 477 aa3.24□□□□□ -1.89
AMBRA1-208ENST00000529558 NCKAP1Q9Y2A7 1128 aa3.24□□□□□ -1.89
AMBRA1-208ENST00000529558 TMED5Q9Y3A6 229 aa3.24□□□□□ -1.89
AMBRA1-208ENST00000529558 ATG4BQ9Y4P1 393 aa3.24□□□□□ -1.89
AMBRA1-208ENST00000529558 PTCH1Q13635 1447 aa3.24□□□□□ -1.89
AMBRA1-208ENST00000529558 A0A1W2PN81 502 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 LINC01553A4QN01 128 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 ZNF587BE7ETH6 402 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 K7EQM0 130 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 LGALS8O00214 317 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 TNFRSF13BO14836 293 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CASQ2O14958 399 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SLC28A2O43868 658 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 KIF5CO60282 957 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 RAMP2O60895 175 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 KCNJ13O60928 360 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 PDE9AO76083 593 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 HMBSP08397 361 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 GSTA2P09210 222 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 HIST1H2AGP0C0S8 130 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CT45A8P0DMV1 189 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CT45A9P0DMV2 189 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 HLA-DOBP13765 273 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 HOXB2P14652 356 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CDH3P22223 829 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 ALDH4A1P30038 563 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 PPP2R1AP30153 589 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CHRNA7P36544 502 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SLC1A3P43003 542 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 MTIF2P46199 727 aaKnown RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 ATP5OP48047 213 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SLC1A6P48664 564 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 TNFRSF17Q02223 184 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SP3Q02447 781 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 TRAF3Q13114 568 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 DDX39BQ13838 428 aaKnown RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 RBMS2Q15434 407 aaKnown RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 PRTGQ2VWP7 1150 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SPATS1Q496A3 300 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 GPR33Q49SQ1 333 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 KCTD21Q4G0X4 260 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 GPAT3Q53EU6 434 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CT45A2Q5DJT8 189 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 XKR3Q5GH77 459 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 TPGS2Q68CL5 300 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SNRNP48Q6IEG0 339 aaKnown RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 C8orf82Q6P1X6 216 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 RHBDF2Q6PJF5 856 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 TAS2R42Q7RTR8 314 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 TRMT1LQ7Z2T5 733 aaKnown RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 C5orf24Q7Z6I8 188 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 KMT5CQ86Y97 462 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 ADHFE1Q8IWW8 467 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 KLHDC1Q8N7A1 406 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 MAPKAPK5-AS1Q8N8E1 139 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 GBP7Q8N8V2 638 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 LRTM2Q8N967 370 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 ZNF114Q8NC26 417 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SMRP1Q8NCR6 262 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 OR1J1Q8NGS3 322 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 OR52N5Q8NH56 324 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 RLN3Q8WXF3 142 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 PHYHIPQ92561 330 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 HIST1H2ACQ93077 130 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 MCHR2Q969V1 340 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 TMEM45BQ96B21 275 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 C4orf36Q96KX1 117 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 MARK4Q96L34 752 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CNOT6LQ96LI5 555 aaKnown RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 BTBD9Q96Q07 612 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 ZNF607Q96SK3 696 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 ZPBPQ9BS86 351 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 DCLK3Q9C098 648 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 LAT2Q9GZY6 243 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 APOBEC3GQ9HC16 384 aaKnown RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CHST11Q9NPF2 352 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 TCF7L2Q9NQB0 619 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SDR39U1Q9NRG7 319 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 FGF21Q9NSA1 209 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 IL36AQ9UHA7 158 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 PILRAQ9UKJ1 303 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SLC7A7Q9UM01 511 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 FOXJ3Q9UPW0 622 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 CAB39Q9Y376 341 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 ARID2Q68CP9 1835 aa3.23□□□□□ -1.89
AMBRA1-208ENST00000529558 SF3B1O75533 1304 aaKnown RBP eCLIP3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 KIF16BQ96L93 1317 aa3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 SPATA31D1Q6ZQQ2 1576 aa3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 PTPRUQ92729 1446 aa3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 A0A0G2JPF8 293 aa3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 TRBV5-5A0A0J9YX44 114 aa3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 C4orf47A7E2U8 309 aa3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 ZNF732B4DXR9 585 aa3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 HNRNPCL3B7ZW38 293 aa3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 PRKRAO75569 313 aaKnown RBP3.22□□□□□ -1.89
AMBRA1-208ENST00000529558 KIAA0754O94854 1291 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms