RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 KIAA0408Q6ZU52 694 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 ABHD13Q7L211 337 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 MDGA2Q7Z553 956 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 WDR53Q7Z5U6 358 aaPredicted RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 CDC20BQ86Y33 519 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 GPALPP1Q8IXQ4 340 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 PALM2Q8IXS6 379 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 LRRC57Q8N9N7 239 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 ZNF740Q8NDX6 193 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 B3GNT7Q8NFL0 401 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 MBD6Q96DN6 1003 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 MFSD3Q96ES6 412 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 C18orf12Q96KH6 178 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 CCDC138Q96M89 665 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 KIFC1Q9BW19 673 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 TSGA10Q9BZW7 698 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 CLK4Q9HAZ1 481 aaKnown RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 EIF2B3Q9NR50 452 aaKnown RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 INTS10Q9NVR2 710 aaKnown RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 HPF1Q9NWY4 346 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 KCMF1Q9P0J7 381 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 SAMD15Q9P1V8 674 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 B4GALT7Q9UBV7 327 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 ACAD8Q9UKU7 415 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 YARS2Q9Y2Z4 477 aaKnown RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 FLNAP21333 2647 aaKnown RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 A0A0G2JNJ9 132 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 TCRBV16S1A1N1A0A5B0 115 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 PABPN1LA6NDY0 278 aaKnown RBP8.37□□□□□ -1.07
VPS11-203ENST00000529545 URADA6NGE7 173 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 A6NNC1 897 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 FAM166BA8MTA8 275 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 FAM171A2A8MVW0 826 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 OR1F1O43749 312 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 CEP104O60308 925 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 WDR1O75083 606 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 AVILO75366 819 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 ZFAND5O76080 213 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 MYO1DO94832 1006 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 RAF1P04049 648 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 CDH1P12830 882 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 RNH1P13489 461 aaKnown RBP8.37□□□□□ -1.07
VPS11-203ENST00000529545 ETS1P14921 441 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 MGAT1P26572 445 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 ARNTP27540 789 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 CCR8P51685 355 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 CLCN7P51798 805 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 DLX5P56178 289 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 OLR1P78380 273 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 BTG2P78543 158 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 BASP1P80723 227 aaKnown RBP8.37□□□□□ -1.07
VPS11-203ENST00000529545 RELBQ01201 579 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 SNX1Q13596 522 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 CUL1Q13616 776 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 KEAP1Q14145 624 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
VPS11-203ENST00000529545 WLSQ5T9L3 541 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 SEL1L2Q5TEA6 688 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 NDUFAF5Q5TEU4 345 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 HECTD2Q5U5R9 776 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 LRRC8EQ6NSJ5 796 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 NEPROQ6NW34 567 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 CLEC9AQ6UXN8 241 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 C4orf22Q6V702 233 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 Q71RC1 249 aaPredicted RBP8.37□□□□□ -1.07
VPS11-203ENST00000529545 KIAA1328Q86T90 577 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 CILP2Q8IUL8 1156 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 AFAP1L2Q8N4X5 818 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 TC2NQ8N9U0 490 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 PSD4Q8NDX1 1056 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 NFAM1Q8NET5 270 aaPredicted RBP8.37□□□□□ -1.07
VPS11-203ENST00000529545 OR2M7Q8NG81 312 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 FAM222BQ8WU58 562 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 ASB15Q8WXK1 588 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 KCNJ9Q92806 393 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 SARAFQ96BY9 339 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 VMP1Q96GC9 406 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 HAUS8Q9BT25 410 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 RHBGQ9H310 441 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 LDAHQ9H6V9 325 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 EXO5Q9H790 373 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 ZDHHC11Q9H8X9 412 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 ALKBH4Q9NXW9 302 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 Q9UFV3 132 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 PACSIN2Q9UNF0 486 aaPredicted RBP8.37□□□□□ -1.07
VPS11-203ENST00000529545 DHRS7Q9Y394 339 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 AKAP6Q13023 2319 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 ZNF407Q9C0G0 2248 aa8.37□□□□□ -1.07
VPS11-203ENST00000529545 DNAJC13O75165 2243 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 SLC16A5O15375 505 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 C8GP07360 202 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 INHBBP09529 407 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 HIST1H2AGP0C0S8 130 aaPredicted RBP8.36□□□□□ -1.07
VPS11-203ENST00000529545 ZNF888P0CJ79 500 aaPredicted RBP8.36□□□□□ -1.07
VPS11-203ENST00000529545 GABRA1P14867 456 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 HIST1H2ADP20671 130 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 MAOAP21397 527 aa8.36□□□□□ -1.07
VPS11-203ENST00000529545 RPL22P35268 128 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms