RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ATP1A4Q13733 1029 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 NKG7Q16617 165 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 HKDC1Q2TB90 917 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 KBTBD12Q3ZCT8 623 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 PRAMEF13Q5VWM6 474 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 C8orf74Q6P047 294 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 LCTLQ6UWM7 567 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 VN1R4Q7Z5H5 301 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 CCDC25Q86WR0 208 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 NKAPQ8N5F7 415 aaKnown RBP8.01□□□□□ -1.13
SSBP3-212ENST00000528930 METTL27Q8N6F8 245 aaPredicted RBP8.01□□□□□ -1.13
SSBP3-212ENST00000528930 CSNK1A1LQ8N752 337 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 NOA1Q8NC60 698 aaKnown RBP8.01□□□□□ -1.13
SSBP3-212ENST00000528930 MNS1Q8NEH6 495 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 OR56A3Q8NH54 315 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 FKBP10Q96AY3 582 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 PTERQ96BW5 349 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 PYCR2Q96C36 320 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 FBXL8Q96CD0 374 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 HIST1H2AHQ96KK5 128 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 OR4K3Q96R72 315 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 GPR22Q99680 433 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 RBBP8Q99708 897 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 CPNE1Q99829 537 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 HIST1H2AJQ99878 128 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 H2AFJQ9BTM1 129 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 PCBD2Q9H0N5 130 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 CAB39LQ9H9S4 337 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 POPDC3Q9HBV1 291 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 ARL15Q9NXU5 204 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 GPN3Q9UHW5 284 aaPredicted RBP8.01□□□□□ -1.13
SSBP3-212ENST00000528930 RUVBL1Q9Y265 456 aaKnown RBP8.01□□□□□ -1.13
SSBP3-212ENST00000528930 PADI2Q9Y2J8 665 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 MAU2Q9Y6X3 613 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 IGLV3-12A0A075B6K2 115 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 SERTM1A2A2V5 107 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 NPEPPSL1A6NEC2 478 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 FOXS1O43638 330 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 CLDN14O95500 239 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 GUCA1CO95843 209 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 PIM1P11309 404 aaPredicted RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 CDH1P12830 882 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 CCND1P24385 295 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 OTX2P32243 289 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 GP5P40197 560 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 FOLR3P41439 243 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 ILF2Q12905 390 aaKnown RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 TSNQ15631 228 aaKnown RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 ZKSCAN8Q15776 578 aaPredicted RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 MUM1Q2TAK8 710 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 GRTP1Q5TC63 336 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 GARNL3Q5VVW2 1013 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 CAPN13Q6MZZ7 669 aaPredicted RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 PRMT9Q6P2P2 845 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 MEX3BQ6ZN04 569 aaKnown RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 MED25Q71SY5 747 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 PPP1R32Q7Z5V6 425 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 ADCK2Q7Z695 626 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 MRGPREQ86SM8 312 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 C17orf64Q86WR6 236 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 RAB43Q86YS6 212 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 DMRTC2Q8IXT2 367 aaPredicted RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 TMEM102Q8N9M5 508 aaPredicted RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 WFDC11Q8NEX6 87 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 ABHD11Q8NFV4 315 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 OR4K1Q8NGD4 311 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 FBF1Q8TES7 1133 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 CDKL2Q92772 493 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 ALKBH8Q96BT7 664 aaKnown RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 TM4SF19Q96DZ7 209 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 UBXN10Q96LJ8 280 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 MYCBPQ99417 103 aaPredicted RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 SARGQ9BW04 601 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 FUT8Q9BYC5 575 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 TRIM54Q9BYV2 358 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 ACBD3Q9H3P7 528 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 WDR54Q9H977 334 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 VIPAS39Q9H9C1 493 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 ZNF304Q9HCX3 659 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 MED4Q9NPJ6 270 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 UTP6Q9NYH9 597 aaKnown RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 CTSFQ9UBX1 484 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 ST6GALNAC2Q9UJ37 374 aa8□□□□□ -1.13
SSBP3-212ENST00000528930 MRPS2Q9Y399 296 aaKnown RBP8□□□□□ -1.13
SSBP3-212ENST00000528930 FEZF1A0PJY2 475 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CCL21O00585 134 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 TXNDC9O14530 226 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SOCS6O14544 535 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 PHGDHO43175 533 aaKnown RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 ERLIN1O75477 346 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 STATHP02808 62 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CD1DP15813 335 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 IGFBP2P18065 325 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 MMP11P24347 488 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 ECHS1P30084 290 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SPRP35270 261 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SLC26A3P40879 764 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 BCL6P41182 706 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CA7P43166 264 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 TDGF1P3P51864 188 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms