RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TLDC2A0PJX2 215 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 E2F3O00716 465 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 PRMT3O60678 531 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 UGDHO60701 494 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 PRAMEF4O60810 478 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 CDH16O75309 829 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 SH3BGRLO75368 114 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 COX6A1P12074 109 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 MTTPP55157 894 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 CPSF6Q16630 551 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN1-215ENST00000528396 AP5B1Q2VPB7 878 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 PRAMEF9Q5VWM5 478 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 ADNP2Q6IQ32 1131 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 WDR93Q6P2C0 686 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 CPEB2Q7Z5Q1 589 aaKnown RBP12.62□□□□□ -0.39
CAPN1-215ENST00000528396 LAS2Q8IYD9 372 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 CYP4X1Q8N118 509 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 ZADH2Q8N4Q0 377 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 ADAMTS18Q8TE60 1221 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 EPS8L3Q8TE67 593 aaKnown RBP12.62□□□□□ -0.39
CAPN1-215ENST00000528396 CMTM7Q96FZ5 175 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 PTCHD1Q96NR3 888 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 F2RL3Q96RI0 385 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 SERINC2Q96SA4 455 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 TUBB6Q9BUF5 446 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 NPLQ9BXD5 320 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-215ENST00000528396 ZNF700Q9H0M5 742 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 C5AR2Q9P296 337 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 PCTPQ9UKL6 214 aa12.62□□□□□ -0.39
CAPN1-215ENST00000528396 PRRC2CQ9Y520 2896 aaKnown RBP12.62□□□□□ -0.39
CAPN1-215ENST00000528396 IGHV1-45A0A0A0MS14 117 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 OR2W5A6NFC9 320 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 A8MT66 165 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 MAGEB17A8MXT2 336 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 CLDN4O14493 209 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 GLRA3O75311 464 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 SEC24DO94855 1032 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-215ENST00000528396 OTCP00480 354 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 TGFB1P01137 390 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 PDGFAP04085 211 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 SERPINA7P05543 415 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 SMIM10L1P0DMW3 83 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 CERS1P27544 350 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 PIK3CBP42338 1070 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 SSR2P43308 183 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 CCT5P48643 541 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 SOX8P57073 446 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 OR4D2P58180 307 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 PCDH1Q08174 1060 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 IFT88Q13099 833 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 ABHD17CQ6PCB6 329 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 TMEM205Q6UW68 189 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 LANCL3Q6ZV70 420 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 VN1R5Q7Z5H4 357 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 ANKRD37Q7Z713 158 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 TDRPQ86YL5 185 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 CA13Q8N1Q1 262 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 CCDC63Q8NA47 563 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 HUS1BQ8NHY5 278 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 ZNF473Q8WTR7 871 aaKnown RBP12.61□□□□□ -0.39
CAPN1-215ENST00000528396 SMIM10Q96HG1 83 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 MAGEB10Q96LZ2 347 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-215ENST00000528396 MTERF1Q99551 399 aaKnown RBP12.61□□□□□ -0.39
CAPN1-215ENST00000528396 SMAD5Q99717 465 aaKnown RBP12.61□□□□□ -0.39
CAPN1-215ENST00000528396 MESP1Q9BRJ9 268 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 TBCDQ9BTW9 1192 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 MS4A8Q9BY19 250 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 IQCGQ9H095 443 aaKnown RBP12.61□□□□□ -0.39
CAPN1-215ENST00000528396 EPS8L2Q9H6S3 715 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 MLXIPLQ9NP71 852 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 SEMA4BQ9NPR2 832 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-215ENST00000528396 TMEM216Q9P0N5 145 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 RNF11Q9Y3C5 154 aa12.61□□□□□ -0.39
CAPN1-215ENST00000528396 LOC102723996A0A087X1L8 192 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 IGHV3-20A0A0C4DH32 117 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 C4orf51C9J302 202 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 H0YIV9 168 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 SAP18O00422 153 aaKnown RBP12.6□□□□□ -0.39
CAPN1-215ENST00000528396 COPEO14579 308 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 SUV39H1O43463 412 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 PRR35P0CG20 571 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 PLA2G2AP14555 144 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 ATP5F1P24539 256 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-215ENST00000528396 PTX3P26022 381 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-215ENST00000528396 CASRP41180 1078 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 HERVK_113P63132 956 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 RHAGQ02094 409 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 SLC13A2Q13183 592 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 E2F2Q14209 437 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 ZRSR2Q15696 482 aaKnown RBP12.6□□□□□ -0.39
CAPN1-215ENST00000528396 BTBD16Q32M84 506 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 ADPRMQ3LIE5 342 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 SFT2D3Q587I9 215 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 COLEC12Q5KU26 742 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 KHDRBS2Q5VWX1 349 aaKnown RBP12.6□□□□□ -0.39
CAPN1-215ENST00000528396 RIPOR1Q6ZS17 1223 aa12.6□□□□□ -0.39
CAPN1-215ENST00000528396 MILR1Q7Z6M3 343 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms