RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 KLHL2O95198 593 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 TBX6O95947 436 aaPredicted RBP31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 UQCRHP07919 91 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 TYK2P29597 1187 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 TNFSF10P50591 281 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 IRF9Q00978 393 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 CHIT1Q13231 466 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 HIST2H2ACQ16777 129 aaPredicted RBP31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 ABHD17BQ5VST6 288 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 HIST2H2AA3Q6FI13 130 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 KLC3Q6P597 504 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 CA13Q8N1Q1 262 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 OR2L5Q8NG80 312 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 CCT6BQ92526 530 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 UBE2E3Q969T4 207 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 AGPAT4Q9NRZ5 378 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 OPTCQ9UBM4 332 aa31.06■■■□□ 2.56
SSSCA1-205ENST00000527920 IGKV3D-11A0A0A0MRZ8 115 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 TRAV17A0A0B4J275 112 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 ERI3O43414 337 aaKnown RBP31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 B4GALT2O60909 372 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 INHBAP08476 426 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 SERPINB9P50453 376 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 OR4D2P58180 307 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 BTN3A2P78410 334 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 ACTN3Q08043 901 aaPredicted RBP31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 ADAMTS18Q8TE60 1221 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 REXO4Q9GZR2 422 aaKnown RBP31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 PRDM9Q9NQV7 894 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 NTNG1Q9Y2I2 539 aa31.05■■■□□ 2.56
SSSCA1-205ENST00000527920 MAGEA12P43365 314 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 NAA30Q147X3 362 aaPredicted RBP31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 INAQ16352 499 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 TRIM40Q6P9F5 258 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 TAOK1Q7L7X3 1001 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 PTCHD1Q96NR3 888 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 QRFPRQ96P65 431 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 GPR78Q96P69 363 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 MMACHCQ9Y4U1 282 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 ESPL1Q14674 2120 aa31.04■■■□□ 2.56
SSSCA1-205ENST00000527920 DOPEY2Q9Y3R5 2298 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 KLK8O60259 260 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 SERPINB1P30740 379 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 TGM3Q08188 693 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 SETDB1Q15047 1291 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 METTL2BQ6P1Q9 378 aaKnown RBP31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 LAS2Q8IYD9 372 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 CATSPER1Q8NEC5 780 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 TRIM44Q96DX7 344 aaPredicted RBP31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 ZNF354BQ96LW1 612 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 PAFAH2Q99487 392 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 ZNF180Q9UJW8 692 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 IKBKGQ9Y6K9 419 aa31.03■■■□□ 2.56
SSSCA1-205ENST00000527920 TCRBV16S1A1N1A0A5B0 115 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 B3GALT2O43825 422 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 CBX6O95503 412 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 WDPCPO95876 746 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 EPB42P16452 691 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 CNTFP26441 200 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 ALDH18A1P54886 795 aaKnown RBP31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 ABHD17CQ6PCB6 329 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 ARMC2Q8NEN0 867 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 OR1N1Q8NGS0 311 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 PLA2G3Q9NZ20 509 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 STMN3Q9NZ72 180 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 SCN2AQ99250 2005 aa31.02■■■□□ 2.56
SSSCA1-205ENST00000527920 KRT38O76015 456 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 SLC26A5P58743 744 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 BTG2P78543 158 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 ZNF33BQ06732 778 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 NR6A1Q15406 480 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 FHL5Q5TD97 284 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 ADNP2Q6IQ32 1131 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 LGI4Q8N135 537 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 SRFBP1Q8NEF9 429 aaKnown RBP31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 SERINC2Q96SA4 455 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 KCNK13Q9HB14 408 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 CPAMD8Q8IZJ3 1885 aa31.01■■■□□ 2.55
SSSCA1-205ENST00000527920 COL12A1Q99715 3063 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 OR5H15A6NDH6 313 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 GFAPP14136 432 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 PLA2G16P53816 162 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 MTTPP55157 894 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 RAB38P57729 211 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 MRPL49Q13405 166 aaKnown RBP31■■■□□ 2.55
SSSCA1-205ENST00000527920 RUNX2Q13950 521 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 ACER2Q5QJU3 275 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 MED27Q6P2C8 311 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 AMER2Q8N7J2 671 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 ZNF473Q8WTR7 871 aaKnown RBP31■■■□□ 2.55
SSSCA1-205ENST00000527920 ROGDIQ9GZN7 287 aa31■■■□□ 2.55
SSSCA1-205ENST00000527920 TNPO3Q9Y5L0 923 aaKnown RBP31■■■□□ 2.55
SSSCA1-205ENST00000527920 A0A087WUV0 522 aaPredicted RBP30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 SYNDIG1LA6NDD5 238 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 FAM227AF5H4B4 570 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 CDK2AP1O14519 115 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 ABHD2P08910 425 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 MYBL2P10244 700 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 MAOAP21397 527 aa30.99■■■□□ 2.55
SSSCA1-205ENST00000527920 MSH2P43246 934 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms