RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MINDY1Q8N5J2 469 aa14.46□□□□□ -0.09
USP47-207ENST00000527733 FAM174AQ8TBP5 190 aa14.46□□□□□ -0.09
USP47-207ENST00000527733 APIPQ96GX9 242 aa14.46□□□□□ -0.09
USP47-207ENST00000527733 PYURFQ96I23 114 aa14.46□□□□□ -0.09
USP47-207ENST00000527733 PTCHD1Q96NR3 888 aa14.46□□□□□ -0.09
USP47-207ENST00000527733 BRF2Q9HAW0 419 aa14.46□□□□□ -0.09
USP47-207ENST00000527733 STOML2Q9UJZ1 356 aa14.46□□□□□ -0.09
USP47-207ENST00000527733 SIT1Q9Y3P8 196 aa14.46□□□□□ -0.09
USP47-207ENST00000527733 IRGMA1A4Y4 181 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 F3P13726 295 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 TALDO1P37837 337 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 ACVR1Q04771 509 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 DAG1Q14118 895 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 OR52E8Q6IFG1 317 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 OGFOD2Q6N063 350 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 HACD2Q6Y1H2 254 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 FAM220AQ7Z4H9 259 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 RABEPKQ7Z6M1 372 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 COMMD2Q86X83 199 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 SLC22A15Q8IZD6 547 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 RAB8BQ92930 207 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 EPHX3Q9H6B9 360 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 NCDNQ9UBB6 729 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 YBX2Q9Y2T7 364 aaKnown RBP14.46□□□□□ -0.1
USP47-207ENST00000527733 WDR45Q9Y484 360 aa14.46□□□□□ -0.1
USP47-207ENST00000527733 PPP6CO00743 305 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 OLFM2O95897 454 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 CCNA2P20248 432 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 DNAJA1P31689 397 aaKnown RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 RPS6KA3P51812 740 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 DECR1Q16698 335 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 TNFAIP8L3Q5GJ75 292 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 SLC15A3Q8IY34 581 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 SMYD1Q8NB12 490 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 PRR11Q96HE9 360 aaPredicted RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 RBCK1Q9BYM8 510 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 BHLHE41Q9C0J9 482 aaPredicted RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 STRADBQ9C0K7 418 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 OR8D2Q9GZM6 311 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 MCM8Q9UJA3 840 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 OAZ3Q9UMX2 235 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 CA5BQ9Y2D0 317 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 LOC100506127A0A0U1RQW1 187 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 ANGPTL1O95841 491 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 JMJD7P0C870 316 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 ARNTP27540 789 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 GANABQ14697 944 aaKnown RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 GRM7Q14831 915 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 TCTE1Q5JU00 501 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 ADGRG6Q86SQ4 1221 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 METTL27Q8N6F8 245 aaPredicted RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP47-207ENST00000527733 LKAAEAR1Q8TD35 194 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 UHRF1Q96T88 793 aaPredicted RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 SLITRK2Q9H156 845 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 POLR2J3Q9H1A7 115 aaKnown RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 KLHL1Q9NR64 748 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 FARSBQ9NSD9 589 aaKnown RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 MAP10Q9P2G4 905 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 ANKMY1Q9P2S6 941 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 ADAM30Q9UKF2 790 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 PCDHGA4Q9Y5G9 962 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 N6AMT1Q9Y5N5 214 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 AQP4P55087 323 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 RBBP4Q09028 425 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 TARDBPQ13148 414 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP47-207ENST00000527733 TMEM31Q5JXX7 168 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 FAM109BQ6ICB4 259 aaPredicted RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 OR10G2Q8NGC3 310 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 BIRC8Q96P09 236 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 TAPBPLQ9BX59 468 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 ACTR10Q9NZ32 417 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 STX11O75558 287 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 KRT33AO76009 404 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 CAPGP40121 348 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 HYAL1Q12794 435 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 RIT1Q92963 219 aa14.45□□□□□ -0.1
USP47-207ENST00000527733 RPF2Q9H7B2 306 aaKnown RBP14.45□□□□□ -0.1
USP47-207ENST00000527733 SMIM31A0A1B0GVY4 71 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 EFCAB10A6NFE3 127 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 MPZL2O60487 215 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 MAGP20916 626 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 RPP38P78345 283 aaKnown RBP14.44□□□□□ -0.1
USP47-207ENST00000527733 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.44□□□□□ -0.1
USP47-207ENST00000527733 IKBIPQ70UQ0 350 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 ATP6V1C2Q8NEY4 427 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 MTERF3Q96E29 417 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 HSH2DQ96JZ2 352 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 NECTIN3Q9NQS3 549 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 NUMA1Q14980 2115 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 XKRYO14609 159 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 SCAMP2O15127 329 aaKnown RBP14.44□□□□□ -0.1
USP47-207ENST00000527733 H1F0P07305 194 aaKnown RBP14.44□□□□□ -0.1
USP47-207ENST00000527733 MAOBP27338 520 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 GSTM2P28161 218 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 GRK6P43250 576 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 VMACQ2NL98 169 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 IER5LQ5T953 404 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 MSANTD1Q6ZTZ1 278 aa14.44□□□□□ -0.1
USP47-207ENST00000527733 BNIPLQ7Z465 357 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms