RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 SHISA7A6NL88 538 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 MAPK12P53778 367 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 KIAA1024LP59773 190 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 SPIDRQ14159 915 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 NFATC4Q14934 902 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 RGNQ15493 299 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 ZIK1Q3SY52 487 aaPredicted RBP16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 ZDHHC13Q8IUH4 622 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 ADGRF3Q8IZF5 1079 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 HS3ST5Q8IZT8 346 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 TMEM121BQ9BXQ6 578 aaPredicted RBP16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 OCEL1Q9H607 264 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 LIN28AQ9H9Z2 209 aaKnown RBP16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 RAPGEFL1Q9UHV5 662 aa16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 PNMA8BQ9ULN7 279 aaPredicted RBP16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 NDRG2Q9UN36 371 aaKnown RBP16.51■□□□□ 0.23
PCDHA6-202ENST00000527624 A0A0G2JN53 185 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 KCNJ13O60928 360 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 HOXB3P14651 431 aaPredicted RBP16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 AQP1P29972 269 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 BSGP35613 385 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 CTBSQ01459 385 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 COX20Q5RI15 118 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 ERICH5Q6P6B1 374 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 NAGSQ8N159 534 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 OR5AK3PQ8NH89 298 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 ASB12Q8WXK4 309 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 FAM3CQ92520 227 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 DNASE1L2Q92874 299 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 MUS81Q96NY9 551 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 MACROD1Q9BQ69 325 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 SLC35A5Q9BS91 424 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 RAB11FIP5Q9BXF6 653 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 SLC6A16Q9GZN6 736 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 ABCG4Q9H172 646 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 MAGIXQ9H6Y5 334 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 SPHK1Q9NYA1 384 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 ZNF282Q9UDV7 671 aaPredicted RBP16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 TRBV23OR9-2A0A075B6M9 112 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 G3V2T6 193 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 ZNF701M0R085 212 aaPredicted RBP16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 PPM1DO15297 605 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 NDUFS4O43181 175 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 GPR37L1O60883 481 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 SEMA3DO95025 777 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 HPRP00739 348 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 THRBP10828 461 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 CDK4P11802 303 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 HNRNPA2B1P22626 353 aaKnown RBP16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 RPL3P39023 403 aaKnown RBP16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 CRATP43155 626 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 ALDH9A1P49189 494 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 CCINQ13939 588 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 CLVS1Q8IUQ0 354 aaPredicted RBP16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 SYNPOQ8N3V7 929 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 ISOC1Q96CN7 298 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 WDR92Q96MX6 357 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 CHST8Q9H2A9 424 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 MRPS30Q9NP92 439 aaKnown RBP16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 LHX9Q9NQ69 397 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 TAAR2Q9P1P5 351 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 MMP17Q9ULZ9 603 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 SAMD4AQ9UPU9 718 aaKnown RBP16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 KLHL20Q9Y2M5 609 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 U3KQV3 271 aa16.5■□□□□ 0.23
PCDHA6-202ENST00000527624 KDELR2P33947 212 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 PLA2G16P53816 162 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 Q6ZS52 159 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 IKBIPQ70UQ0 350 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 FKBP9P1Q75LS8 142 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 VTCN1Q7Z7D3 282 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 TRIM69Q86WT6 500 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 PGBD3Q8N328 593 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 FBXL6Q8N531 539 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 TMEM168Q9H0V1 697 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 SLC6A20Q9NP91 592 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 GPATCH2Q9NW75 528 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 C5AR2Q9P296 337 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 TRIOO75962 3097 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 A0A1W2PRB8 838 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 LRRC72A6NJI9 287 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 RASGRP1O95267 797 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 ETFAP13804 333 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 PPIBP23284 216 aaKnown RBP16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 HTR1BP28222 390 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 PEBP1P30086 187 aaKnown RBP16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 SOAT1P35610 550 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 BCL6P41182 706 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 HLCSP50747 726 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 LRRC74AQ0VAA2 488 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 PMS2P3Q13401 168 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 SPESP1Q6UW49 350 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 UBE3DQ7Z6J8 389 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 EID3Q8N140 333 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 ZCCHC7Q8N3Z6 543 aaKnown RBP16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 TMEM145Q8NBT3 493 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 DENND6BQ8NEG7 585 aa16.49■□□□□ 0.23
PCDHA6-202ENST00000527624 GOT1L1Q8NHS2 421 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms