RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 H7BY64 318 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 COPEO14579 308 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 STX16O14662 325 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 SUPT3HO75486 399 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 STK16O75716 305 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 WFS1O76024 890 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 FKBP9O95302 570 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 TBX6O95947 436 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-204ENST00000526430 RPS17P08708 135 aaKnown RBP10.34□□□□□ -0.75
NEDD8-204ENST00000526430 DHRS4L1P0CG22 281 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 DNAJA1P31689 397 aaKnown RBP10.34□□□□□ -0.75
NEDD8-204ENST00000526430 FOLR3P41439 243 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 CCT5P48643 541 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PRKAA2P54646 552 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ABATP80404 500 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 RELAQ04206 551 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 CDSNQ15517 529 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PRAMEF17Q5VTA0 474 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PRAMEF13Q5VWM6 474 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ARMC6Q6NXE6 501 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PPP1R32Q7Z5V6 425 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 OR4N4Q8N0Y3 316 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 TCAIMQ8N3R3 496 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ARHGEF39Q8N4T4 335 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PTGR2Q8N8N7 351 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-204ENST00000526430 C19orf47Q8N9M1 422 aaKnown RBP10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ZNF740Q8NDX6 193 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 OR2Y1Q8NGV0 311 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ATL1Q8WXF7 558 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ALKBH8Q96BT7 664 aaKnown RBP10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PHF21BQ96EK2 531 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 WDR34Q96EX3 536 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 SCYL1Q96KG9 808 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 CNDP1Q96KN2 507 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PRAP1Q96NZ9 151 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 NSUN5Q96P11 429 aaKnown RBP10.34□□□□□ -0.75
NEDD8-204ENST00000526430 OR2A5Q96R48 311 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 SARGQ9BW04 601 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ABCF3Q9NUQ8 709 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 TMEM184CQ9NVA4 438 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PCTPQ9UKL6 214 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ZNF490Q9ULM2 529 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-204ENST00000526430 PCDHGB6Q9Y5F9 930 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ACTL7BQ9Y614 415 aa10.34□□□□□ -0.75
NEDD8-204ENST00000526430 ZNF839A8K0R7 811 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 SYCE1LA8MT33 242 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 MASP2O00187 686 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 OR7A17O14581 309 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 HAT1O14929 419 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 WDR47O94967 919 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 MED26O95402 600 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 HBQ1P09105 142 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 CDH1P12830 882 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 IMPDH1P20839 514 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 AGXTP21549 392 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 CCND1P24385 295 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 ARRB2P32121 409 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 CASP2P42575 452 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 IST1P53990 364 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 WDR4P57081 412 aaKnown RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 MEF2AQ02078 507 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 FOXD4Q12950 439 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 TSTA3Q13630 321 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 PCLAFQ15004 111 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 AGBL2Q5U5Z8 902 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 FRMPD2BQ6IN97 320 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 KLC3Q6P597 504 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 NXPE4Q6UWF7 544 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 ZYG11AQ6WRX3 759 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 FRA10AC1Q70Z53 315 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 RNF44Q7L0R7 432 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 CXXC5Q7LFL8 322 aaKnown RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 VN1R4Q7Z5H5 301 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 CROCCP2Q86T23 111 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 PLD3Q8IV08 490 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 RAB42Q8N4Z0 105 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 ARMC2Q8NEN0 867 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 ZNF483Q8TF39 744 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 NINJ1Q92982 152 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 TM4SF19Q96DZ7 209 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 TSNARE1Q96NA8 513 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 TMEM237Q96Q45 408 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 TAAR6Q96RI8 345 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 AICDAQ9GZX7 198 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 SPRTNQ9H040 489 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 MRPS30Q9NP92 439 aaKnown RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 SEMA3GQ9NS98 782 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 ARGLU1Q9NWB6 273 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-204ENST00000526430 OXSMQ9NWU1 459 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 WWOXQ9NZC7 414 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 MXRA5Q9NR99 2828 aa10.33□□□□□ -0.76
NEDD8-204ENST00000526430 KCNE1BA0A087WTH5 132 aa10.32□□□□□ -0.76
NEDD8-204ENST00000526430 FEZF1A0PJY2 475 aa10.32□□□□□ -0.76
NEDD8-204ENST00000526430 E7EQ34 232 aa10.32□□□□□ -0.76
NEDD8-204ENST00000526430 K7EPI3 171 aa10.32□□□□□ -0.76
NEDD8-204ENST00000526430 UBFD1O14562 309 aaKnown RBP10.32□□□□□ -0.76
NEDD8-204ENST00000526430 PRPF4O43172 522 aaKnown RBP eCLIP10.32□□□□□ -0.761e-7■□□□□ 8.7
NEDD8-204ENST00000526430 CCNT2O60583 730 aaKnown RBP10.32□□□□□ -0.76
NEDD8-204ENST00000526430 UNC5CO95185 931 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms