RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ITSN1Q15811 1721 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 MT-CO2P00403 227 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 CCR8P51685 355 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 MC2RQ01718 297 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 PLP2Q04941 152 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 SLBPQ14493 270 aaKnown RBP eCLIP13.24□□□□□ -0.29
LRRK1-202ENST00000525284 DPY19L1Q2PZI1 675 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 CARM1Q86X55 608 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 FAM46DQ8NEK8 389 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 RBP7Q96R05 134 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 ERVW-1Q9UQF0 538 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 PTCH2Q9Y6C5 1203 aa13.24□□□□□ -0.29
LRRK1-202ENST00000525284 H2BFMP0C1H6 154 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CAV2P51636 162 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ZNF41P51814 821 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ZNF181Q2M3W8 571 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ANKRD22Q5VYY1 191 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CARD17Q5XLA6 110 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CXCL17Q6UXB2 119 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CEACAM19Q7Z692 300 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 HERVK_113Q902F9 699 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PTERQ96BW5 349 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ASB9Q96DX5 294 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ZNF419Q96HQ0 510 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 OR2AG1Q9H205 316 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PPM1HQ9ULR3 514 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ABCA9Q8IUA7 1624 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CELP19835 753 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CERS1P27544 350 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ELK4P28324 431 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 EPHX2P34913 555 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 MAP2K4P45985 399 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 DGKQP52824 942 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 SGCAQ16586 387 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 NT5DC1Q5TFE4 455 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 FAM205BPQ63HN1 556 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 MOAP1Q96BY2 351 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ACO2Q99798 780 aaKnown RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 RIOX1Q9H6W3 641 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ERVK13-1Q9NX77 482 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 hCG_1807616A0A1W2PRN6 198 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CDK1P06493 297 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 RETP07949 1114 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 RAB5CP51148 216 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 HABP2Q14520 560 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 TSTD2Q5T7W7 516 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 MFSD5Q6N075 450 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 SLC2A7Q6PXP3 512 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 TRAPPC6BQ86SZ2 158 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 OR13C3Q8NGS6 347 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ALG3Q92685 438 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PYURFQ96I23 114 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 GAS2L1Q99501 681 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 OSBPL7Q9BZF2 842 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PRDM9Q9NQV7 894 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PI15O43692 258 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ABCB7O75027 752 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ZNF821O75541 412 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PRPS1L1P21108 318 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 GJA5P36382 358 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PPP4CP60510 307 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 RRAS2P62070 204 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ANKRD54Q6NXT1 300 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 VITQ6UXI7 678 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CEACAM20Q6UY09 585 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CCDC71Q8IV32 467 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 MCATQ8IVS2 390 aaKnown RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 HSH2DQ96JZ2 352 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ZNF681Q96N22 645 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PAPOLGQ9BWT3 736 aaKnown RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 NIFKQ9BYG3 293 aaKnown RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 POTEKPQ9BYX7 375 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CD8B2A6NJW9 211 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ERI3O43414 337 aaKnown RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 C8orf89P0DMQ9 161 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 CD8BP10966 210 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 GK2Q14410 553 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 ASRGL1Q7L266 308 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 TMCO2Q7Z6W1 182 aaPredicted RBP13.23□□□□□ -0.29
LRRK1-202ENST00000525284 PROKR1Q8TCW9 393 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 HMCESQ96FZ2 354 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 FUNDC2Q9BWH2 189 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 NME7Q9Y5B8 376 aa13.23□□□□□ -0.29
LRRK1-202ENST00000525284 INSIG1O15503 277 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 AGR2O95994 175 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 SNRNP70P08621 437 aaKnown RBP13.22□□□□□ -0.29
LRRK1-202ENST00000525284 OR4Q2P0C623 313 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 SMIM10L2AP0DMW4 78 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 SMIM10L2BP0DMW5 78 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 ALPPL2P10696 532 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 CDK2P24941 298 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 VIPR1P32241 457 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 CTC1Q2NKJ3 1217 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 DCUN1D4Q92564 292 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 RGMAQ96B86 450 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 TGM7Q96PF1 710 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 USB1Q9BQ65 265 aaKnown RBP13.22□□□□□ -0.29
LRRK1-202ENST00000525284 POLDIP3Q9BY77 421 aaKnown RBP13.22□□□□□ -0.29
LRRK1-202ENST00000525284 ADAM18Q9Y3Q7 739 aa13.22□□□□□ -0.29
LRRK1-202ENST00000525284 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms