RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CDC123O75794 336 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SEMA3DO95025 777 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CHEK2O96017 543 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 HPP00738 406 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ENO1P06733 434 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 FURINP09958 794 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 NEFHP12036 1026 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ICAM2P13598 275 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 EPORP19235 508 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CD22P20273 847 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CERS1P27544 350 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PPP2R1BP30154 601 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 TLX1P31314 330 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 HNRNPH1P31943 449 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 BUD31P41223 144 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ARFIP1P53367 373 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CDH13P55290 713 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 RAB38P57729 211 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 DNAJB13P59910 316 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 RPS13P62277 151 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 OLR1P78380 273 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 EEF1A2Q05639 463 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC18A2Q05940 514 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACTN3Q08043 901 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF844Q08AG5 666 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CHAF1BQ13112 559 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC13A2Q13183 592 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CUL3Q13618 768 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 E2F2Q14209 437 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 LY6DQ14210 128 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 NSDHLQ15738 373 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 IMPG1Q17R60 797 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ADPRMQ3LIE5 342 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SGO1Q5FBB7 561 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 DCAF10Q5QP82 559 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF678Q5SXM1 525 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 VWA5B1Q5TIE3 1220 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAM69BQ5VUD6 431 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 LIPMQ5VYY2 423 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CPZQ66K79 652 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAAH2Q6GMR7 532 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ABHD17CQ6PCB6 329 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CYP20A1Q6UW02 462 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 NDUFAF7Q7L592 441 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 NUDT13Q86X67 352 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PDSS2Q86YH6 399 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 KBTBD2Q8IY47 623 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF595Q8IYB9 648 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CYP4X1Q8N118 509 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 DTWD1Q8N5C7 304 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 EFCAB3Q8N7B9 438 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 GOLGA6L1Q8N7Z2 621 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CDYL2Q8N8U2 506 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 MYRIPQ8NFW9 859 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR4F6Q8NGB9 312 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR11G2Q8NGC1 345 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR52B6Q8NGF0 335 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR5T3Q8NGG3 340 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 METTL6Q8TCB7 284 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ADAMTS17Q8TE56 1095 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF473Q8WTR7 871 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SELENOMQ8WWX9 145 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PKNOX2Q96KN3 472 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 NSUN5Q96P11 429 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 QRFPRQ96P65 431 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAM111AQ96PZ2 611 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CDK15Q96Q40 435 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMEM237Q96Q45 408 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 F2RL3Q96RI0 385 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF382Q96SR6 550 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 MTERF1Q99551 399 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 TRMOQ9BU70 441 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 TUBB6Q9BUF5 446 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 MS4A8Q9BY19 250 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 VN1R1Q9GZP7 353 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC25A18Q9H1K4 315 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 KLHL31Q9H511 634 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SYNPO2LQ9H987 977 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 WDR41Q9HAD4 459 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 EML4Q9HC35 981 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF160Q9HCG1 818 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 LYRM4Q9HD34 91 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRDM9Q9NQV7 894 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 LYARQ9NX58 379 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 MS4A12Q9NXJ0 267 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 TEKT2Q9UIF3 430 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PHF11Q9UIL8 331 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF490Q9ULM2 529 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC12A4Q9UP95 1085 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 RNF11Q9Y3C5 154 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF451Q9Y4E5 1061 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 MMACHCQ9Y4U1 282 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PCDHGB7Q9Y5F8 929 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PCDHGA9Q9Y5G4 932 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 HS3ST3B1Q9Y662 390 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 SPEGQ15772 3267 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 USP24Q9UPU5 2620 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 IGHV1-45A0A0A0MS14 117 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 FOXO6A8MYZ6 492 aa5.09□□□□□ -1.59
HMGB1P40-201ENST00000525121 G3V2L1 256 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms