RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TAS2R50P59544 299 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 IRF8Q02556 426 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 DLG1Q12959 904 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 BMPR2Q13873 1038 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 H3F3CQ6NXT2 135 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 QSOX2Q6ZRP7 698 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 ISCA2Q86U28 154 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 CRLF3Q8IUI8 442 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 BEST3Q8N1M1 668 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 CA13Q8N1Q1 262 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 ARMC2Q8NEN0 867 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 MS4A6EQ96DS6 147 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 PTCD3Q96EY7 689 aaKnown RBP17.42■□□□□ 0.38
CAPN1-203ENST00000525013 SEC16BQ96JE7 1060 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 CD244Q9BZW8 370 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 PRDM9Q9NQV7 894 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 IGSF5Q9NSI5 407 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 NUDT4Q9NZJ9 180 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 ABI3Q9P2A4 366 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 MTRF1LQ9UGC7 380 aaKnown RBP17.42■□□□□ 0.38
CAPN1-203ENST00000525013 ERRFI1Q9UJM3 462 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-203ENST00000525013 SLC5A6Q9Y289 635 aa17.42■□□□□ 0.38
CAPN1-203ENST00000525013 CENPEQ02224 2701 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 A0A088AWK7 358 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 A8MUA0 341 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 UBXN8O00124 270 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 E2F3O00716 465 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 B3GALT2O43825 422 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 PRAMEF4O60810 478 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 PRAMEF2O60811 474 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 KERAO60938 352 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 DDAH2O95865 285 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 ZNF10P21506 573 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-203ENST00000525013 HPDP32754 393 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-203ENST00000525013 PHBP35232 272 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 CHIT1Q13231 466 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 HIST2H2ACQ16777 129 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-203ENST00000525013 MEP1AQ16819 746 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 PAGE2BQ5JRK9 111 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 PRAMEF9Q5VWM5 478 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 HIST2H2AA3Q6FI13 130 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 ADNP2Q6IQ32 1131 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 TRIM40Q6P9F5 258 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 LRRC70Q7Z2Q7 622 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 SLC5A8Q8N695 610 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 NXNL1Q96CM4 212 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 C5orf34Q96MH7 638 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 TAAR6Q96RI8 345 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 EFCAB11Q9BUY7 163 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 REXO4Q9GZR2 422 aaKnown RBP17.41■□□□□ 0.38
CAPN1-203ENST00000525013 ANKRD10Q9NXR5 420 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 COPG2Q9UBF2 871 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 ZNF490Q9ULM2 529 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-203ENST00000525013 OSGIN2Q9Y236 505 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 ASB1Q9Y576 335 aa17.41■□□□□ 0.38
CAPN1-203ENST00000525013 A1L4Q6 167 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 TGM3Q08188 693 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 LAPTM5Q13571 262 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 RUNX2Q13950 521 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 INAQ16352 499 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 CEP128Q6ZU80 1094 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 VN1R5Q7Z5H4 357 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 KIF2BQ8N4N8 673 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 MNS1Q8NEH6 495 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 OR2L5Q8NG80 312 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 KCTD4Q8WVF5 259 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 IFT81Q8WYA0 676 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 WDR34Q96EX3 536 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 ATOH8Q96SQ7 321 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 NPAS2Q99743 824 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 SLX1AQ9BQ83 275 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 UTP23Q9BRU9 249 aaKnown RBP17.4■□□□□ 0.38
CAPN1-203ENST00000525013 NPLQ9BXD5 320 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-203ENST00000525013 COPS7BQ9H9Q2 264 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-203ENST00000525013 NECTIN3Q9NQS3 549 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 NINJ2Q9NZG7 142 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 OPTCQ9UBM4 332 aa17.4■□□□□ 0.38
CAPN1-203ENST00000525013 PLEKHB1Q9UF11 243 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-203ENST00000525013 A0A087X1B8 175 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 TCRBV16S1A1N1A0A5B0 115 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 MAN1A2O60476 641 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 RASAL1O95294 804 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 C2P06681 752 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 EPORP19235 508 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 CD22P20273 847 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 MSH2P43246 934 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 IRF9Q00978 393 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 OC90Q02509 493 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-203ENST00000525013 TUBA3CQ13748 450 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 FAM83EQ2M2I3 478 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 ZNF766Q5HY98 468 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 TUBA3EQ6PEY2 450 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 CCDC91Q7Z6B0 441 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 CENPLQ8N0S6 344 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-203ENST00000525013 MMGT1Q8N4V1 131 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 NOA1Q8NC60 698 aaKnown RBP17.39■□□□□ 0.37
CAPN1-203ENST00000525013 NR4A3Q92570 626 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 F2RL3Q96RI0 385 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 CDCP1Q9H5V8 836 aa17.39■□□□□ 0.37
CAPN1-203ENST00000525013 PRTFDC1Q9NRG1 225 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms