RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SOX30O94993 753 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 GCNT3O95395 438 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 ASS1P00966 412 aaKnown RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 SLC2A3P11169 496 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 MATN1P21941 496 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 MMP12P39900 470 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 PCP4P48539 62 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 UBE2IP63279 158 aaKnown RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 RAE1P78406 368 aaKnown RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 PMP22Q01453 160 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 MTA1Q13330 715 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 CAPRIN1Q14444 709 aaKnown RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 UGP2Q16851 508 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 PYCR3Q53H96 274 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 RNASE12Q5GAN4 147 aaKnown RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 INTS11Q5TA45 600 aaKnown RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 IRGCQ6NXR0 463 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 SLC29A4Q7RTT9 530 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 TMTC1Q8IUR5 882 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 FAM57AQ8TBR7 257 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 GLMPQ8WWB7 406 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 NEU4Q8WWR8 484 aaPredicted RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 PDLIM2Q96JY6 352 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 HS6ST2Q96MM7 605 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 SNX18Q96RF0 628 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 RWDD1Q9H446 243 aaPredicted RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 CDCP1Q9H5V8 836 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 ACTR5Q9H9F9 607 aaPredicted RBP6.52□□□□□ -1.37
NEDD8-203ENST00000524927 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 ABHD10Q9NUJ1 306 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 NPIPA1Q9UND3 350 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 TENM3Q9P273 2699 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 GRID2IPA4D2P6 1211 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 TMEM191CA6NGB0 347 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 J3KRW8 73 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 ALOX12BO75342 701 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 RHOBTB3O94955 611 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 HEXIM1O94992 359 aaKnown RBP6.51□□□□□ -1.37
NEDD8-203ENST00000524927 ADCY5O95622 1261 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 FYNP06241 537 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 UMODP07911 640 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 HBQ1P09105 142 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 F3P13726 295 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 GAP43P17677 238 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 MMP11P24347 488 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 TEAD1P28347 426 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 DUSP1P28562 367 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 ARF5P84085 180 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 CDK3Q00526 305 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 RAD51Q06609 339 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 BST2Q10589 180 aaKnown RBP6.51□□□□□ -1.37
NEDD8-203ENST00000524927 TNK1Q13470 666 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 SNTB1Q13884 538 aaKnown RBP6.51□□□□□ -1.37
NEDD8-203ENST00000524927 SLC25A35Q3KQZ1 300 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 TSTD2Q5T7W7 516 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 MLIPQ5VWP3 458 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 B4GALNT4Q76KP1 1039 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 TAC4Q86UU9 113 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 PELI3Q8N2H9 469 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 THAP7Q9BT49 309 aaPredicted RBP6.51□□□□□ -1.37
NEDD8-203ENST00000524927 ELOVL1Q9BW60 279 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 ADGRE3Q9BY15 652 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 RMI1Q9H9A7 625 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 OLFML3Q9NRN5 406 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 GPATCH2LQ9NWQ4 482 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 TBC1D29Q9UFV1 150 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 VANGL2Q9ULK5 521 aa6.51□□□□□ -1.37
NEDD8-203ENST00000524927 TSPAN11A1L157 253 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 ASPDHA6ND91 283 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 CD160O95971 181 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 ALDOAP04075 364 aaKnown RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 FDPSP14324 419 aaKnown RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 XRCC1P18887 633 aaPredicted RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 DRD4P21917 467 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 PSMA5P28066 241 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 GEMIN4P57678 1058 aaKnown RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 TAS2R50P59544 299 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 CFHR3Q02985 330 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 ABRQ12979 859 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 EIF4EBP2Q13542 120 aaPredicted RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 CERS6Q6ZMG9 384 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 SIAH3Q8IW03 269 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 SRFBP1Q8NEF9 429 aaKnown RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 ARHGEF2Q92974 986 aaKnown RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 KTI12Q96EK9 354 aaPredicted RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 DAZAP1Q96EP5 407 aaKnown RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 TRMT61AQ96FX7 289 aaKnown RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 CD180Q99467 661 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 TRIM7Q9C029 511 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 FANCEQ9HB96 536 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 BLOC1S4Q9NUP1 217 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 NOCTQ9UK39 431 aaKnown RBP6.5□□□□□ -1.37
NEDD8-203ENST00000524927 MFHAS1Q9Y4C4 1052 aa6.5□□□□□ -1.37
NEDD8-203ENST00000524927 ANKRD12Q6UB98 2062 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 ILVBLA1L0T0 632 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 OR5H15A6NDH6 313 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 A6NLC8 198 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 USP27XA6NNY8 438 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 ZNHIT1O43257 154 aa6.49□□□□□ -1.37
NEDD8-203ENST00000524927 MTA2O94776 668 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms