RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	RHOBTB1	O94844	696 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CH25H	O95992	272 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	S100A9	P06702	114 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	HOXB7	P09629	217 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CLU	P10909	449 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	DRD5	P21918	477 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CALB2	P22676	271 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	JAK1	P23458	1154 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	PAX7	P23759	505 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	YWHAQ	P27348	245 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	PRDX6	P30041	224 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	GNL1	P36915	607 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	OR1G1	P47890	313 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	RGS7	P49802	495 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	REL	Q04864	619 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	TSTA3	Q13630	321 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	KEAP1	Q14145	624 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	MFSD13A	Q14CX5	517 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	SYCP1	Q15431	976 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	STK11	Q15831	433 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	ANXA2R	Q3ZCQ2	193 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	TCTE1	Q5JU00	501 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	PRAMEF19	Q5SWL8	479 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	SPOUT1	Q5T280	376 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CCNYL2	Q5T2Q4	361 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	FKBP1C	Q5VVH2	108 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CES5A	Q6NT32	575 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	DHRS13	Q6UX07	377 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	BNIPL	Q7Z465	357 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	GPR180	Q86V85	440 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	GRAMD2A	Q8IUY3	354 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	DCLK2	Q8N568	766 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	BBOF1	Q8ND07	529 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	AKR7L	Q8NHP1	331 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	MIPOL1	Q8TD10	442 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	WIPF2	Q8TF74	440 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	NUDCD2	Q8WVJ2	157 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	FBXO32	Q969P5	355 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	SLCO4A1	Q96BD0	722 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	TPD52L3	Q96J77	140 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM81B	Q96LP2	452 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CCDC17	Q96LX7	622 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	HARBI1	Q96MB7	349 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CCT7	Q99832	543 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	DDX50	Q9BQ39	737 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	GATA5	Q9BWX5	397 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	GON7	Q9BXV9	100 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	GPR61	Q9BZJ8	451 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	TRIM2	Q9C040	744 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	TMEM245	Q9H330	911 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	FARSB	Q9NSD9	589 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	NDUFA13	Q9P0J0	144 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	TBC1D7	Q9P0N9	293 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	FOXA2	Q9Y261	457 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	MRPS7	Q9Y2R9	242 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	PRRC2B	Q5JSZ5	2229 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CHD7	Q9P2D1	2997 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	KIF26B	Q2KJY2	2108 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	KANSL1L	A0AUZ9	987 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	C17orf102	A2RUQ5	167 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ANKUB1	A6NFN9	424 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	TMEM202	A6NGA9	273 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	HEPACAM2	A8MVW5	462 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356		K7EQM0	130 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	DNALI1	O14645	258 aa	Predicted RBP	4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	POLR2D	O15514	142 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ADAM12	O43184	909 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	MED7	O43513	233 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	RHBDL1	O75783	438 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF432	O94892	652 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	STAMBP	O95630	424 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	HMBS	P08397	361 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	CALCB	P10092	127 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	CCDC130	P13994	396 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ARRB2	P32121	409 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	OTX2	P32243	289 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	RDX	P35241	583 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	SLC6A12	P48065	614 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	COPB1	P53618	953 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	HMGCS2	P54868	508 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	RPL36A	P83881	106 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ACY1	Q03154	408 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM174B	Q3ZCQ3	159 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	SLC36A3	Q495N2	470 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	TMEM63B	Q5T3F8	832 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	LRRC38	Q5VT99	294 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	DENND2C	Q68D51	928 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	TRIL	Q7L0X0	811 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	TFAP2D	Q7Z6R9	452 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ASPG	Q86U10	573 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	CCDC190	Q86UF4	302 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ZDHHC21	Q8IVQ6	265 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	APCDD1	Q8J025	514 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	PARP16	Q8N5Y8	322 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	RNF148	Q8N7C7	305 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	FADS6	Q8N9I5	356 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	SPERT	Q8NA61	448 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	MINDY2	Q8NBR6	621 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	LEMD2	Q8NC56	503 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 73 ms