RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 FAM212BQ9NTI7 297 aaPredicted RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 DNAJC17Q9NVM6 304 aaKnown RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 P4HTMQ9NXG6 502 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.48□□□□□ -1.69
SKP1-211ENST00000523359 MAD2L2Q9UI95 211 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 GMEB1Q9Y692 573 aa4.48□□□□□ -1.69
SKP1-211ENST00000523359 V9GYY5 206 aaPredicted RBP4.48□□□□□ -1.69
SKP1-211ENST00000523359 KIF16BQ96L93 1317 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 TRBV2A0A0J9YWF9 115 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 LOC101059948A0A1B0GTJ6 334 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 CYSRT1A8MQ03 144 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 PMS2P5A8MQ11 134 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 AK1P00568 194 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 ABHD2P08910 425 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 FAM58BPP0C7Q3 252 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 FRMD6-AS1P0C7T7 363 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 UBTFL6P0CB48 400 aaPredicted RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 THRBP10828 461 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 VCLP18206 1134 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 EPORP19235 508 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 EFNA1P20827 205 aaPredicted RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 ALDH4A1P30038 563 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 PRKCIP41743 596 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 PLD1Q13393 1074 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 RRS1Q15050 365 aaKnown RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 ODF4Q2M2E3 257 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 UGT3A2Q3SY77 523 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 SLC35E4Q6ICL7 350 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 MOXD1Q6UVY6 613 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 CCDC80Q76M96 950 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 BMPERQ8N8U9 685 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 ST7LQ8TDW4 575 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 PHLDA1Q8WV24 401 aaPredicted RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 PEX13Q92968 403 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 ATP6V1G3Q96LB4 118 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 USP28Q96RU2 1077 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 RIOK1Q9BRS2 568 aaKnown RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 URM1Q9BTM9 101 aaKnown RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 MIS12Q9H081 205 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 RAB33BQ9H082 229 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 C8orf33Q9H7E9 229 aaPredicted RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 RMND5AQ9H871 391 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 CDH20Q9HBT6 801 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 NGBQ9NPG2 151 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 HPS4Q9NQG7 708 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 TXLNGQ9NUQ3 528 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 RAB20Q9NX57 234 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 TRMT6Q9UJA5 497 aaKnown RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 STX8Q9UNK0 236 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 WDR83OSQ9Y284 106 aa4.47□□□□□ -1.69
SKP1-211ENST00000523359 STRAPQ9Y3F4 350 aaKnown RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 DDX49Q9Y6V7 483 aaKnown RBP4.47□□□□□ -1.69
SKP1-211ENST00000523359 UBE4BO95155 1302 aa4.46□□□□□ -1.69
SKP1-211ENST00000523359 NPHP3Q7Z494 1330 aa4.46□□□□□ -1.69
SKP1-211ENST00000523359 A0A1W2PPK0 400 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 SLC15A5A6NIM6 579 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 ERVV-2B6SEH9 535 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 H0Y8G0 127 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 E2F3O00716 465 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 RHBDL1O75783 438 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 MT-ATP6P00846 226 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 IVLP07476 585 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 CCDC192P0DO97 292 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 SAGP10523 405 aaPredicted RBP4.46□□□□□ -1.7
SKP1-211ENST00000523359 RALAP11233 206 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 CCDC130P13994 396 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 SFNP31947 248 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 CEACAM8P31997 349 aaPredicted RBP4.46□□□□□ -1.7
SKP1-211ENST00000523359 OTX2P32243 289 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 SOAT1P35610 550 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 UCP2P55851 309 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 PDZK1IP1Q13113 114 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 TAF13Q15543 124 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 LRIT3Q3SXY7 679 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 CES3Q6UWW8 571 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 USP43Q70EL4 1123 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 ERO1BQ86YB8 467 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 FAM219AQ8IW50 185 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 MMD2Q8IY49 270 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 TIGD4Q8IY51 512 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 CLYBLQ8N0X4 340 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 EID3Q8N140 333 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 TRIML2Q8N7C3 387 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 VANGL1Q8TAA9 524 aaPredicted RBP4.46□□□□□ -1.7
SKP1-211ENST00000523359 DNASE2BQ8WZ79 361 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 PIGBQ92521 554 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 NT5C3BQ969T7 300 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 SNRNP40Q96DI7 357 aaKnown RBP4.46□□□□□ -1.7
SKP1-211ENST00000523359 CCDC51Q96ER9 411 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 TPD52L3Q96J77 140 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 C7orf34Q96L11 122 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 FAM20AQ96MK3 541 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 PGLYRP2Q96PD5 576 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 CARD6Q9BX69 1037 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 SLC2A11Q9BYW1 496 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 DNAJC4Q9NNZ3 241 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 SIX2Q9NPC8 291 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 FGF21Q9NSA1 209 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 SPHK1Q9NYA1 384 aa4.46□□□□□ -1.7
SKP1-211ENST00000523359 VPS18Q9P253 973 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms