RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 PITHD1Q9GZP4 211 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-223ENST00000523125 EHD1Q9H4M9 534 aa11.61□□□□□ -0.55
VEGFA-223ENST00000523125 CNOT10Q9H9A5 744 aaKnown RBP11.61□□□□□ -0.55
VEGFA-223ENST00000523125 NECTIN3Q9NQS3 549 aa11.61□□□□□ -0.55
VEGFA-223ENST00000523125 DNAJC11Q9NVH1 559 aa11.61□□□□□ -0.55
VEGFA-223ENST00000523125 WWOXQ9NZC7 414 aa11.61□□□□□ -0.55
VEGFA-223ENST00000523125 CD274Q9NZQ7 290 aa11.61□□□□□ -0.55
VEGFA-223ENST00000523125 OSGIN2Q9Y236 505 aa11.61□□□□□ -0.55
VEGFA-223ENST00000523125 CLDN16Q9Y5I7 305 aa11.61□□□□□ -0.55
VEGFA-223ENST00000523125 CACNA1DQ01668 2161 aa11.61□□□□□ -0.55
VEGFA-223ENST00000523125 A0A0G2JN53 185 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 TCRBV16S1A1N1A0A5B0 115 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 A1L4Q6 167 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 HMX2A2RU54 273 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 CLEC3AO75596 197 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 STK16O75716 305 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 WISP2O76076 250 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 MST1P26927 711 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 GSTM2P28161 218 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 STX2P32856 288 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 CD96P40200 585 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 STXBP1P61764 594 aaKnown RBP11.6□□□□□ -0.55
VEGFA-223ENST00000523125 BTN3A2P78410 334 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 TUBA3CQ13748 450 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 E2F2Q14209 437 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 PDK4Q16654 411 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 MEP1AQ16819 746 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 C4orf17Q53FE4 359 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 UBAP2Q5T6F2 1119 aaKnown RBP11.6□□□□□ -0.55
VEGFA-223ENST00000523125 TUBA3EQ6PEY2 450 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 KRT78Q8N1N4 520 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 TTLQ8NG68 377 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 SEC16BQ96JE7 1060 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 C5orf34Q96MH7 638 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 ATOH8Q96SQ7 321 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 CD244Q9BZW8 370 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 RHBGQ9H310 441 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 ALG9Q9H6U8 611 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 PRDM9Q9NQV7 894 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 IGSF5Q9NSI5 407 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 RNF112Q9ULX5 631 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 PCDHGB6Q9Y5F9 930 aa11.6□□□□□ -0.55
VEGFA-223ENST00000523125 ANKDD1BA6NHY2 528 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 TGFBR3LH3BV60 316 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 CLGNO14967 610 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 LRRTM2O43300 516 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 ERI3O43414 337 aaKnown RBP11.59□□□□□ -0.55
VEGFA-223ENST00000523125 RASAL1O95294 804 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 STSP08842 583 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 MTHFD2P13995 350 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 TFEBP19484 476 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 CASP2P42575 452 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 HNRNPFP52597 415 aaKnown RBP11.59□□□□□ -0.55
VEGFA-223ENST00000523125 PMP22Q01453 160 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 NAB1Q13506 487 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 XKR6Q5GH73 641 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 ZNF766Q5HY98 468 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 ABHD17CQ6PCB6 329 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 SCUBE1Q8IWY4 988 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 CENPLQ8N0S6 344 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-223ENST00000523125 CYP4X1Q8N118 509 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 SNX31Q8N9S9 440 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 TMEM52Q8NDY8 209 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 OR2L5Q8NG80 312 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 DNAJB8Q8NHS0 232 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 SUN3Q8TAQ9 357 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 STAG3L4Q8TBR4 150 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 NXNL1Q96CM4 212 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 PTCD3Q96EY7 689 aaKnown RBP11.59□□□□□ -0.55
VEGFA-223ENST00000523125 NPLQ9BXD5 320 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-223ENST00000523125 HES7Q9BYE0 225 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 CDCP1Q9H5V8 836 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 PRDM7Q9NQW5 492 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 ANKRD10Q9NXR5 420 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 ABI3Q9P2A4 366 aa11.59□□□□□ -0.55
VEGFA-223ENST00000523125 SAGE2PA6NJ88 616 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 GABRR3A8MPY1 467 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 A8MUA0 341 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 UBXN8O00124 270 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 PSMD12O00232 456 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-223ENST00000523125 CYR61O00622 381 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 CCNT2O60583 730 aaKnown RBP11.58□□□□□ -0.56
VEGFA-223ENST00000523125 KERAO60938 352 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 LTA4HP09960 611 aaKnown RBP11.58□□□□□ -0.56
VEGFA-223ENST00000523125 COL8A1P27658 744 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 CRABP2P29373 138 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 PLA2G16P53816 162 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 KCNK10P57789 538 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 IRF9Q00978 393 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 CKAP4Q07065 602 aaKnown RBP11.58□□□□□ -0.56
VEGFA-223ENST00000523125 PCDH1Q08174 1060 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 CHIT1Q13231 466 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 OR1C1Q15619 314 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 TBCCQ15814 346 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 ZNF468Q5VIY5 522 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-223ENST00000523125 SPINK14Q6IE38 97 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 C8orf74Q6P047 294 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 RAPH1Q70E73 1250 aa11.58□□□□□ -0.56
VEGFA-223ENST00000523125 MAMDC2Q7Z304 686 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms