RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CSMD2Q7Z408 3487 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 NCKAP5O14513 1909 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 FREM3P0C091 2139 aa14.42□□□□□ -0.1
MRPS28-209ENST00000522987 ANKRD17O75179 2603 aaKnown RBP14.41□□□□□ -0.1
MRPS28-209ENST00000522987 TCRBV16S1A1N1A0A5B0 115 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 NCF1BA6NI72 391 aaPredicted RBP14.41□□□□□ -0.1
MRPS28-209ENST00000522987 NCF1CA8MVU1 366 aaPredicted RBP14.41□□□□□ -0.1
MRPS28-209ENST00000522987 PRRG2O14669 202 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 ADAM10O14672 748 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 HS6ST1O60243 411 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 PIAS1O75925 651 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 NCF1P14598 390 aaPredicted RBP14.41□□□□□ -0.1
MRPS28-209ENST00000522987 HNRNPFP52597 415 aaKnown RBP14.41□□□□□ -0.1
MRPS28-209ENST00000522987 SKP1P63208 163 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 NXPE4Q6UWF7 544 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 KIAA0408Q6ZU52 694 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 CEP128Q6ZU80 1094 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 MDGA2Q7Z553 956 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 CLNKQ7Z7G1 428 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 SULF2Q8IWU5 870 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 KLHL7Q8IXQ5 586 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.41□□□□□ -0.1
MRPS28-209ENST00000522987 FAM47BQ8NA70 645 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 TMEM52Q8NDY8 209 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 ACTRT1Q8TDG2 376 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 SARGQ9BW04 601 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 PELI2Q9HAT8 420 aa14.41□□□□□ -0.1
MRPS28-209ENST00000522987 IGKV3D-11A0A0A0MRZ8 115 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 G3V3Y1 287 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 TGFBR3LH3BV60 316 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 FCHO1O14526 889 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 PRKNO60260 465 aaPredicted RBP14.4□□□□□ -0.1
MRPS28-209ENST00000522987 WDR47O94967 919 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 AHRP35869 848 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 HLCSP50747 726 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 RUNX2Q13950 521 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 PPP1R3AQ16821 1122 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 ADNP2Q6IQ32 1131 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 MEX3BQ6ZN04 569 aaKnown RBP14.4□□□□□ -0.1
MRPS28-209ENST00000522987 CAPN12Q6ZSI9 719 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 LGI4Q8N135 537 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 CYP4Z2PQ8N1L4 340 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 TMEM156Q8N614 296 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 TRPV3Q8NET8 790 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 CREB3L4Q8TEY5 395 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 NCLNQ969V3 563 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 CAPZA3Q96KX2 299 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 DMRTA2Q96SC8 542 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 TRIM31Q9BZY9 425 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 DEFB127Q9H1M4 99 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 TRMT1Q9NXH9 659 aaKnown RBP14.4□□□□□ -0.1
MRPS28-209ENST00000522987 KCMF1Q9P0J7 381 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 ZNF223Q9UK11 482 aaPredicted RBP14.4□□□□□ -0.1
MRPS28-209ENST00000522987 HRH3Q9Y5N1 445 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 CELSR1Q9NYQ6 3014 aa14.4□□□□□ -0.1
MRPS28-209ENST00000522987 ADGRG4Q8IZF6 3080 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 FAM95CA0A1B0GW59 222 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 URADA6NGE7 173 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 FAM90A27PA6NNH2 459 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 ERI3O43414 337 aaKnown RBP14.39□□□□□ -0.11
MRPS28-209ENST00000522987 PEX1O43933 1283 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 ITGA10O75578 1167 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 ENO2P09104 434 aaPredicted RBP14.39□□□□□ -0.11
MRPS28-209ENST00000522987 SMIM10L1P0DMW3 83 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 ZNF37AP17032 561 aaPredicted RBP14.39□□□□□ -0.11
MRPS28-209ENST00000522987 IVDP26440 423 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 HNRNPH1P31943 449 aaKnown RBP14.39□□□□□ -0.11
MRPS28-209ENST00000522987 PTGS2P35354 604 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 CLCN2P51788 898 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 TLE4Q04727 773 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 SLBPQ14493 270 aaKnown RBP eCLIP14.39□□□□□ -0.11
MRPS28-209ENST00000522987 FASTKD3Q14CZ7 662 aaKnown RBP14.39□□□□□ -0.11
MRPS28-209ENST00000522987 TSNQ15631 228 aaKnown RBP14.39□□□□□ -0.11
MRPS28-209ENST00000522987 FRA10AC1Q70Z53 315 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 STRA8Q7Z7C7 330 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 SPATA6LQ8N4H0 392 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 RPRMLQ8N4K4 120 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 APCDD1LQ8NCL9 501 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 ARMC2Q8NEN0 867 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 B3GNT7Q8NFL0 401 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 OR52N2Q8NGI0 321 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 CA5BP1Q8WTZ4 195 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 ANKRD49Q8WVL7 239 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 SMIM10Q96HG1 83 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 FAR2Q96K12 515 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 PRM3Q9NNZ6 103 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 PRTFDC1Q9NRG1 225 aa14.39□□□□□ -0.11
MRPS28-209ENST00000522987 KLF13Q9Y2Y9 288 aaPredicted RBP14.39□□□□□ -0.11
MRPS28-209ENST00000522987 NINQ8N4C6 2090 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 PINLYPA6NC86 204 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 NKX2-6A6NCS4 301 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 FAM166BA8MTA8 275 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 E9PLN8 166 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 SERPINA6P08185 405 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 AGAP20933 346 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 PLA2G16P53816 162 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 TAS2R39P59534 338 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 SLC13A2Q13183 592 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 CMPK2Q5EBM0 449 aa14.38□□□□□ -0.11
MRPS28-209ENST00000522987 PDIK1LQ8N165 341 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms