RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 UBXN8O00124 270 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 ERI3O43414 337 aaKnown RBP17.53■□□□□ 0.4
SPIDR-220ENST00000522900 CLEC3AO75596 197 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 LTA4HP09960 611 aaKnown RBP17.53■□□□□ 0.4
SPIDR-220ENST00000522900 EDN3P14138 238 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 CRABP2P29373 138 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 CD96P40200 585 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 PLA2G16P53816 162 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 IRF9Q00978 393 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 NAB1Q13506 487 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 WHAMMP3Q1A5X7 153 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 QSOX2Q6ZRP7 698 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 BCORP1Q8N888 145 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 TTLQ8NG68 377 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 KCTD4Q8WVF5 259 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 ZNF592Q92610 1267 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 PTCD3Q96EY7 689 aaKnown RBP17.53■□□□□ 0.4
SPIDR-220ENST00000522900 FAR2Q96K12 515 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 SIGLEC12Q96PQ1 595 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 EHD1Q9H4M9 534 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 NMRAL1Q9HBL8 299 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 PRDM9Q9NQV7 894 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 OLAHQ9NV23 265 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 PLEKHB1Q9UF11 243 aaPredicted RBP17.53■□□□□ 0.4
SPIDR-220ENST00000522900 DMGDHQ9UI17 866 aaKnown RBP17.53■□□□□ 0.4
SPIDR-220ENST00000522900 OSGIN2Q9Y236 505 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 SLC5A6Q9Y289 635 aa17.53■□□□□ 0.4
SPIDR-220ENST00000522900 RP1L1Q8IWN7 2480 aaPredicted RBP17.53■□□□□ 0.4
SPIDR-220ENST00000522900 TCRBV16S1A1N1A0A5B0 115 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 SUPT3HB4E1H0 165 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 PSMD12O00232 456 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 PRAMEF2O60811 474 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 SUPT3HO75486 399 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 WISP2O76076 250 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 LDLRP01130 860 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 S100BP04271 92 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 HNRNPFP52597 415 aaKnown RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 CHIT1Q13231 466 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 TUBA3CQ13748 450 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 ADPRMQ3LIE5 342 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 TUBA3EQ6PEY2 450 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 TBC1D1Q86TI0 1168 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 CENPLQ8N0S6 344 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 MMGT1Q8N4V1 131 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 NOA1Q8NC60 698 aaKnown RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 TMEM52Q8NDY8 209 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 NFAM1Q8NET5 270 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 ELP5Q8TE02 316 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 F2RL3Q96RI0 385 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 PITHD1Q9GZP4 211 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 REXO4Q9GZR2 422 aaKnown RBP17.52■□□□□ 0.4
SPIDR-220ENST00000522900 CDCP1Q9H5V8 836 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 NINJ2Q9NZG7 142 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 NUDT4Q9NZJ9 180 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 ACOT9Q9Y305 439 aa17.52■□□□□ 0.4
SPIDR-220ENST00000522900 KERAO60938 352 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 DDAH2O95865 285 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 C2P06681 752 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 MTHFD2P13995 350 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 MST1P26927 711 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 TDGF1P3P51864 188 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 PMP22Q01453 160 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 IRF8Q02556 426 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 UAP1Q16222 522 aaPredicted RBP17.51■□□□□ 0.39
SPIDR-220ENST00000522900 MEP1AQ16819 746 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 ABHD17CQ6PCB6 329 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 CNTRLQ7Z7A1 2325 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 OR2L5Q8NG80 312 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 SUN3Q8TAQ9 357 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 HES7Q9BYE0 225 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 CLDN16Q9Y5I7 305 aa17.51■□□□□ 0.39
SPIDR-220ENST00000522900 TGFBR3LH3BV60 316 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 RASAL1O95294 804 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 GSTM2P28161 218 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 PPP2R1BP30154 601 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 CASP2P42575 452 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 KCNK10P57789 538 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 ZNF766Q5HY98 468 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 ZNF468Q5VIY5 522 aaPredicted RBP17.5■□□□□ 0.39
SPIDR-220ENST00000522900 SPINK14Q6IE38 97 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 LRRC70Q7Z2Q7 622 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 UBE3DQ7Z6J8 389 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 SCUBE1Q8IWY4 988 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 MDS2Q8NDY4 140 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 NR4A3Q92570 626 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 SEC16BQ96JE7 1060 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 C5orf34Q96MH7 638 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 EFCAB11Q9BUY7 163 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 NPLQ9BXD5 320 aaPredicted RBP17.5■□□□□ 0.39
SPIDR-220ENST00000522900 PRDM7Q9NQW5 492 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 SNX15Q9NRS6 342 aa17.5■□□□□ 0.39
SPIDR-220ENST00000522900 A0A087X1B8 175 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 LRRC14BA6NHZ5 514 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 SAGE2PA6NJ88 616 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 GABRR3A8MPY1 467 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 CYR61O00622 381 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 LRRTM2O43300 516 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 B3GALT2O43825 422 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 SH3BGRLO75368 114 aa17.49■□□□□ 0.39
SPIDR-220ENST00000522900 CLDN1O95832 211 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms