RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 GPR22Q99680 433 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 NPLQ9BXD5 320 aaPredicted RBP17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 EHD1Q9H4M9 534 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 NECTIN3Q9NQS3 549 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 CD274Q9NZQ7 290 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 LRFN1Q9P244 771 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 COPG2Q9UBF2 871 aa17.3■□□□□ 0.36
TOP1MT-216ENST00000522121 LRIT2A6NDA9 550 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 FAM159BA6NKW6 160 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 C4orf51C9J302 202 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 CCL21O00585 134 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 CLDN4O14493 209 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 FCHO1O14526 889 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 B3GALT2O43825 422 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 CLEC3AO75596 197 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 STK16O75716 305 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 WISP3O95389 354 aaPredicted RBP17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 SP1P08047 785 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 CD1DP15813 335 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 CASQ1P31415 396 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 SPRP35270 261 aaPredicted RBP17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 ST13P50502 369 aaKnown RBP17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 ALDH6A1Q02252 535 aaKnown RBP17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 CAV1Q03135 178 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 C2orf54Q08AI8 447 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 KRTCAP3Q53RY4 240 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 SLC25A25Q6KCM7 469 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 CTAGE3PQ8IX95 158 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 SNX31Q8N9S9 440 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 ADAMTS18Q8TE60 1221 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 MS4A6EQ96DS6 147 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 TMEM79Q9BSE2 394 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 HES7Q9BYE0 225 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 DEFB126Q9BYW3 111 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 GRHL1Q9NZI5 618 aa17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 MRPS33Q9Y291 106 aaKnown RBP17.29■□□□□ 0.36
TOP1MT-216ENST00000522121 SCN2AQ99250 2005 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 A0A0G2JN53 185 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 A8MUA0 341 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 TAPBPO15533 448 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 TPP2P29144 1249 aaPredicted RBP17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 HNRNPH1P31943 449 aaKnown RBP17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 CA7P43166 264 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 HSPA7P48741 367 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 CYB561P49447 251 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 PLTPP55058 493 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 MLF1P58340 268 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 RAB10P61026 200 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 MAPKAPK3Q16644 382 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 PDK4Q16654 411 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 XKR6Q5GH73 641 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 GRTP1Q5TC63 336 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 TRIM40Q6P9F5 258 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 GALNTL5Q7Z4T8 443 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 OR2L5Q8NG80 312 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 TMEM125Q96AQ2 219 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 PTCD3Q96EY7 689 aaKnown RBP17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 MAGED4Q96JG8 741 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 EFCAB11Q9BUY7 163 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 PHACTR1Q9C0D0 580 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 REXO4Q9GZR2 422 aaKnown RBP17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 AICDAQ9GZX7 198 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 RAB17Q9H0T7 212 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 PRM3Q9NNZ6 103 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 RNF112Q9ULX5 631 aa17.28■□□□□ 0.36
TOP1MT-216ENST00000522121 TEX15Q9BXT5 2789 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 ASPDHA6ND91 283 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 SYNDIG1LA6NDD5 238 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 CCNT2O60583 730 aaKnown RBP17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 SLC19A2O60779 497 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 SLC25A12O75746 678 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 NEURL1O76050 574 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 CLCN2P51788 898 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 PLA2G16P53816 162 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 HSD17B7P56937 341 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 RAB38P57729 211 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 GPX6P59796 221 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 TGM3Q08188 693 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 SLC13A2Q13183 592 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 LAPTM5Q13571 262 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 RUNX2Q13950 521 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 RCN2Q14257 317 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 TERF2Q15554 542 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 OR4D1Q15615 310 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 HIST2H2ACQ16777 129 aaPredicted RBP17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 FBXO48Q5FWF7 155 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 PAGE2BQ5JRK9 111 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 HIST2H2AA3Q6FI13 130 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 RAPH1Q70E73 1250 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 CCDC25Q86WR0 208 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 NFAM1Q8NET5 270 aaPredicted RBP17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 B3GNT7Q8NFL0 401 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 THAP3Q8WTV1 239 aaPredicted RBP17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 KIAA1191Q96A73 305 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 ESAMQ96AP7 390 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 UBXN10Q96LJ8 280 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 GPR137Q96N19 417 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 SERINC2Q96SA4 455 aa17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 COPS7BQ9H9Q2 264 aaPredicted RBP17.27■□□□□ 0.36
TOP1MT-216ENST00000522121 PRTFDC1Q9NRG1 225 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms