RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DNAJC17Q9NVM6 304 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TRMT1Q9NXH9 659 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CISD1Q9NZ45 108 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CWC15Q9P013 229 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 KIAA1456Q9P272 454 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 RCOR3Q9P2K3 495 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 DEC1Q9P2X7 70 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 POU2F3Q9UKI9 436 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 VANGL2Q9ULK5 521 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CLEC4EQ9ULY5 219 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PYCARDQ9ULZ3 195 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 GUCA1BQ9UMX6 200 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 OR51B4Q9Y5P0 310 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PIAS3Q9Y6X2 628 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TSC2P49815 1807 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 KIAA1671Q9BY89 1806 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 GBF1Q92538 1859 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 MYO7AQ13402 2215 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 A0A0G2JPF8 293 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 KANSL1LA0AUZ9 987 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ILVBLA1L0T0 632 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 LRRD1A4D1F6 860 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TMEM221A6NGB7 291 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 USP27XA6NNY8 438 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 MIF4GDA9UHW6 222 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 HNRNPCL3B7ZW38 293 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 H0Y626 953 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 K7EQS6 105 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 M0R296 226 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 KIF5CO60282 957 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 HNRNPCL1O60812 293 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 GAS8-AS1O95177 125 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 FTCDO95954 541 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 PLGP00747 810 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 EGFP01133 1207 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ATP1A1P05023 1023 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 APODP05090 189 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 RHOCP08134 193 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 HNRNPCL4P0DMR1 293 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 GOT1P17174 413 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 DDX5P17844 614 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ERCC2P18074 760 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 KDELR1P24390 212 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 IL4RP24394 825 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 HLA-FP30511 346 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 OR1E1P30953 314 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CD70P32970 193 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CTNNA1P35221 906 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 GGT5P36269 586 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CETN2P41208 172 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CSKP41240 450 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CASP2P42575 452 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CDKN2BP42772 138 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 RXRGP48443 463 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 NDST2P52849 883 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CDH6P55285 790 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 EIF3BP55884 814 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 RWDD2BP57060 319 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 YBEYP58557 167 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TPI1P60174 286 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 UFM1P61960 85 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 PHEXP78562 749 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 GNA12Q03113 381 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 SULT2A1Q06520 285 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 SLC20A2Q08357 652 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CDH18Q13634 790 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 DPYSQ14117 519 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TFDP2Q14188 446 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 DPYSL3Q14195 570 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 PON2Q15165 354 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 E2F5Q15329 346 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 RPS6KA1Q15418 735 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TAZQ16635 292 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 SETMARQ53H47 684 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ODF2Q5BJF6 829 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ANKRD20A8PQ5CZ79 823 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 KCNT1Q5JUK3 1230 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 STPG1Q5TH74 334 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TMEM81Q6P7N7 255 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 FOXL2NBQ6ZUU3 175 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 R3HCC1LQ7Z5L2 792 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TBC1D1Q86TI0 1168 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 SETD3Q86TU7 594 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ADIPOR2Q86V24 386 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 NLRP14Q86W24 1093 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 VSIG1Q86XK7 387 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 MFN1Q8IWA4 741 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 DSELQ8IZU8 1212 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 APCDD1Q8J025 514 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 UMODL1-AS1Q8N2C9 162 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CARNMT1Q8N4J0 409 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 METTL27Q8N6F8 245 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 PQLC3Q8N755 202 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 UBL4BQ8N7F7 174 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TRIM58Q8NG06 486 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 OR52K2Q8NGK3 314 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 EXD1Q8NHP7 514 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 NFKBIDQ8NI38 313 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CCDC26Q8TAB7 109 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms