RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 TBK1Q9UHD2 729 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 RNF11Q9Y3C5 154 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 CLDN16Q9Y5I7 305 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 NBASA2RRP1 2371 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 CPAMD8Q8IZJ3 1885 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 A0A1W2PPM1 405 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 TTLL8A6PVC2 850 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 MAN1A2O60476 641 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 EPB42P16452 691 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 TSPAN8P19075 237 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 CNTFP26441 200 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 SOX11P35716 441 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 STXBP1P61764 594 aaKnown RBP12.51□□□□□ -0.41
VEGFA-219ENST00000518824 FOXK1P85037 733 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 DDX39BQ13838 428 aaKnown RBP12.51□□□□□ -0.41
VEGFA-219ENST00000518824 NSDHLQ15738 373 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 SFT2D3Q587I9 215 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 FCRLBQ6BAA4 426 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 GRHL2Q6ISB3 625 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 MED27Q6P2C8 311 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 KLC3Q6P597 504 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 IGFL2Q6UWQ7 119 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 TIFABQ6ZNK6 161 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 TAOK1Q7L7X3 1001 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 KBTBD2Q8IY47 623 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 CYP4X1Q8N118 509 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 TTLQ8NG68 377 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 OR2L5Q8NG80 312 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 OR52B6Q8NGF0 335 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 METTL21AQ8WXB1 218 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 MIB2Q96AX9 1013 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 OR1F2PQ96R84 312 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 NPAS2Q99743 824 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 PITHD1Q9GZP4 211 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-219ENST00000518824 REXO4Q9GZR2 422 aaKnown RBP12.51□□□□□ -0.41
VEGFA-219ENST00000518824 OR51B5Q9H339 312 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 IPPKQ9H8X2 491 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 RIC8BQ9NVN3 520 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.51□□□□□ -0.416e-10■□□□□ 8.2
VEGFA-219ENST00000518824 NTNG1Q9Y2I2 539 aa12.51□□□□□ -0.41
VEGFA-219ENST00000518824 V9GYY5 206 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-219ENST00000518824 CNTRLQ7Z7A1 2325 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 URADA6NGE7 173 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 A8MT66 165 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 A8MUA0 341 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 MAGEB17A8MXT2 336 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 ZNF500O60304 480 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-219ENST00000518824 ETHE1O95571 254 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 SERPINA7P05543 415 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 RBP1P09455 135 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 COL6A2P12110 1019 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 RNH1P13489 461 aaKnown RBP12.5□□□□□ -0.41
VEGFA-219ENST00000518824 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 PPP2R1BP30154 601 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 SLCO1A2P46721 670 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 NEK2P51955 445 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 VSNL1P62760 191 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 LAPTM5Q13571 262 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 CRB2Q5IJ48 1285 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 AGAP7PQ5VUJ5 663 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 PAPD4Q6PIY7 484 aaKnown RBP12.5□□□□□ -0.41
VEGFA-219ENST00000518824 Q6ZS92 163 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 MYLK4Q86YV6 388 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-219ENST00000518824 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 FAM47BQ8NA70 645 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 HUS1BQ8NHY5 278 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 UBLCP1Q8WVY7 318 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-219ENST00000518824 PNPLA2Q96AD5 504 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 PTCHD1Q96NR3 888 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 AGAP4Q96P64 663 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 MTERF1Q99551 399 aaKnown RBP12.5□□□□□ -0.41
VEGFA-219ENST00000518824 NOL11Q9H8H0 719 aaKnown RBP12.5□□□□□ -0.41
VEGFA-219ENST00000518824 PCTPQ9UKL6 214 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 G3BP2Q9UN86 482 aaKnown RBP12.5□□□□□ -0.41
VEGFA-219ENST00000518824 ANGPTL3Q9Y5C1 460 aa12.5□□□□□ -0.41
VEGFA-219ENST00000518824 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 CCDC189A1A4V9 331 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 CYR61O00622 381 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 PRMT3O60678 531 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 ALPPP05187 535 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 RPS17P08708 135 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 PYGBP11216 843 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 UQCRFS1P47985 274 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 CDH13P55290 713 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 LIM2P55344 173 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 OR4D2P58180 307 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 RPS13P62277 151 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 SRSF11Q05519 484 aaKnown RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 TRAF3Q13114 568 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 MFAP5Q13361 173 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 INPP5JQ15735 1006 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 CPSF6Q16630 551 aaKnown RBP eCLIP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 HIST2H2ACQ16777 129 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-219ENST00000518824 TSNAXIP1Q2TAA8 658 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 BTBD16Q32M84 506 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 PAGE2BQ5JRK9 111 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 HIST2H2AA3Q6FI13 130 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 TRIM40Q6P9F5 258 aa12.49□□□□□ -0.41
VEGFA-219ENST00000518824 ISLR2Q6UXK2 745 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms