RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ERVK-18Q9QC07 812 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 TESMINQ9Y4I5 508 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 PCDHB14Q9Y5E9 798 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 DNMT3AQ9Y6K1 912 aaPredicted RBP17.58■□□□□ 0.41
SDC2-202ENST00000518385 KCNE1BA0A087WTH5 132 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 ARHGEF33A8MVX0 844 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 H3BM21 787 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 LILRB5O75023 590 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 FAM20BO75063 409 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 SEC22BO75396 215 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 JUPP14923 745 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 DEFA1P59665 94 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 DEFA3P59666 94 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 CNTN1Q12860 1018 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 TBCEQ15813 527 aaPredicted RBP17.57■□□□□ 0.4
SDC2-202ENST00000518385 PIP5KL1Q5T9C9 394 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 FAM219BQ5XKK7 198 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 TRMT11Q7Z4G4 463 aaKnown RBP17.57■□□□□ 0.4
SDC2-202ENST00000518385 AKAP14Q86UN6 197 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 LIX1Q8N485 282 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 FAM3CQ92520 227 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 MYDGFQ969H8 173 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 ELOVL6Q9H5J4 265 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 GPRC5BQ9NZH0 403 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 ZNF232Q9UNY5 417 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 CKAP5Q14008 2032 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 SEMG1P04279 462 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 GSTT2P0CG29 244 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 GSTT2BP0CG30 244 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 PSMB9P28065 219 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 CD6P30203 668 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 HNF4AP41235 474 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 PNLIPRP1P54315 467 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 PFN3P60673 137 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 RPS14P62263 151 aaKnown RBP17.57■□□□□ 0.4
SDC2-202ENST00000518385 OLR1P78380 273 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 RPA4Q13156 261 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 CST6Q15828 149 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 ZXDCQ2QGD7 858 aaPredicted RBP17.57■□□□□ 0.4
SDC2-202ENST00000518385 SPANXN4Q5MJ08 99 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 C10orf62Q5T681 223 aaPredicted RBP17.57■□□□□ 0.4
SDC2-202ENST00000518385 NEK5Q6P3R8 708 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 AGTRAPQ6RW13 159 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 SLC22A16Q86VW1 577 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 RGL4Q8IZJ4 473 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 TTC29Q8NA56 475 aaPredicted RBP17.57■□□□□ 0.4
SDC2-202ENST00000518385 ZNF540Q8NDQ6 660 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 OR56A3Q8NH54 315 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 NDNFQ8TB73 568 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 CHTF18Q8WVB6 975 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 SELENOMQ8WWX9 145 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 SGCDQ92629 289 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 CMTM7Q96FZ5 175 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 COX14Q96I36 57 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 BTBD2Q9BX70 525 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 OR2AG1Q9H205 316 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 KLHL3Q9UH77 587 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 ZNF229Q9UJW7 825 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 SLC22A14Q9Y267 594 aa17.57■□□□□ 0.4
SDC2-202ENST00000518385 EYSQ5T1H1 3165 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 LRRK1Q38SD2 2015 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 TMEM202A6NGA9 273 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 METTL15A6NJ78 407 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 A8MVJ9 347 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 EFCAB9A8MZ26 197 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 GPR89AB7ZAQ6 455 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 FFAR3O14843 346 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 RGS13O14921 159 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 GPR42O15529 346 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 MYO1DO94832 1006 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 KLF8O95600 359 aaPredicted RBP17.56■□□□□ 0.4
SDC2-202ENST00000518385 MT-ND2P03891 347 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 FABP3P05413 133 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 GPR89BP0CG08 455 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 HSD3B1P14060 373 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 PPIBP23284 216 aaKnown RBP17.56■□□□□ 0.4
SDC2-202ENST00000518385 HSD3B2P26439 372 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 ETV6P41212 452 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 IST1P53990 364 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 IFITM3Q01628 133 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 CSTF3Q12996 717 aaKnown RBP17.56■□□□□ 0.4
SDC2-202ENST00000518385 VEZF1Q14119 521 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 INAVAQ3KP66 663 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 FAHD1Q6P587 224 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 GCNT7Q6ZNI0 430 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 THOC6Q86W42 341 aaKnown RBP17.56■□□□□ 0.4
SDC2-202ENST00000518385 OR2L2Q8NH16 312 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 ERLEC1Q96DZ1 483 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 HHIPQ96QV1 700 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 EPYCQ99645 322 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 GABARAPL3Q9BY60 117 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 STOX2Q9P2F5 926 aaPredicted RBP17.56■□□□□ 0.4
SDC2-202ENST00000518385 RAPGEFL1Q9UHV5 662 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 MKLN1Q9UL63 735 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 CORO2BQ9UQ03 480 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 PEX16Q9Y5Y5 336 aa17.56■□□□□ 0.4
SDC2-202ENST00000518385 ATG2BQ96BY7 2078 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 MGAT4DA6NG13 374 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 AGAP5A6NIR3 686 aa17.55■□□□□ 0.4
SDC2-202ENST00000518385 PLK4O00444 970 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms